Gene : Phvul.009G236600 P. vulgaris v2.1
Defline:  (1 of 1) PTHR22957//PTHR22957:SF274 - TBC1 DOMAIN FAMILY MEMBER GTPASE-ACTIVATING PROTEIN // SUBFAMILY NOT NAMED Genomic Order:  2415
Name:  ? Phvul.009G236600 Secondary Identifier:  ? PAC:37150631
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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.009G236600 0.5kb upstream 0.5kb upstream 5485 true Chr09: 35428608-35434092 Phaseolus vulgaris
Phvul.009G236600 0.5kb upstream 0.5kb upstream 500 false Chr09: 35433593-35434092 Phaseolus vulgaris
Phvul.009G236600 0.5kb downstream 0.5kb downstream 5485 true Chr09: 35428108-35433592 Phaseolus vulgaris
Phvul.009G236600 0.5kb downstream 0.5kb downstream 500 false Chr09: 35428108-35428607 Phaseolus vulgaris
Phvul.009G236600 1.0kb upstream 1.0kb upstream 5985 true Chr09: 35428608-35434592 Phaseolus vulgaris
Phvul.009G236600 1.0kb upstream 1.0kb upstream 1000 false Chr09: 35433593-35434592 Phaseolus vulgaris
Phvul.009G236600 1.0kb downstream 1.0kb downstream 5985 true Chr09: 35427608-35433592 Phaseolus vulgaris
Phvul.009G236600 1.0kb downstream 1.0kb downstream 1000 false Chr09: 35427608-35428607 Phaseolus vulgaris
Phvul.009G236600 2.0kb upstream 2.0kb upstream 6985 true Chr09: 35428608-35435592 Phaseolus vulgaris
Phvul.009G236600 2.0kb upstream 2.0kb upstream 2000 false Chr09: 35433593-35435592 Phaseolus vulgaris
Phvul.009G236600 2.0kb downstream 2.0kb downstream 6985 true Chr09: 35426608-35433592 Phaseolus vulgaris
Phvul.009G236600 2.0kb downstream 2.0kb downstream 2000 false Chr09: 35426608-35428607 Phaseolus vulgaris
Phvul.009G236600 5.0kb upstream 5.0kb upstream 9985 true Chr09: 35428608-35438592 Phaseolus vulgaris
Phvul.009G236600 5.0kb upstream 5.0kb upstream 5000 false Chr09: 35433593-35438592 Phaseolus vulgaris
Phvul.009G236600 5.0kb downstream 5.0kb downstream 9985 true Chr09: 35423608-35433592 Phaseolus vulgaris
Phvul.009G236600 5.0kb downstream 5.0kb downstream 5000 false Chr09: 35423608-35428607 Phaseolus vulgaris
Phvul.009G236600 10.0kb upstream 10.0kb upstream 14985 true Chr09: 35428608-35443592 Phaseolus vulgaris
Phvul.009G236600 10.0kb upstream 10.0kb upstream 10000 false Chr09: 35433593-35443592 Phaseolus vulgaris
Phvul.009G236600 10.0kb downstream 10.0kb downstream 14985 true Chr09: 35418608-35433592 Phaseolus vulgaris
Phvul.009G236600 10.0kb downstream 10.0kb downstream 10000 false Chr09: 35418608-35428607 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122314968 5265 Fabidae View MSA
124063811 5270 Rosid View MSA
123743864 5271 Pentapetalae View MSA
122788044 5272 Eudicot View MSA
122042280 5273 Angiosperm View MSA
121350721 5274 Embryophyte View MSA
123428432 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 11.4784 0.0 29.73    
cufflinks 11.6673 0.0 30.2217    
cufflinks 12.1112 0.0 31.3398    
cufflinks 5.69581 0.0 15.3412   Low
cufflinks 8.08697 0.0 21.2919    
cufflinks 8.49437 0.0 22.247    
cufflinks 9.73024 0.0 25.328    
cufflinks 8.12195 0.0 21.274    
cufflinks 13.911 0.0 35.9625    
cufflinks 23.1985 0.0 60.5688   High
cufflinks 6.84748 0.0 18.2253   Low

0 Strain