Gene : Phvul.009G235300 P. vulgaris v2.1
Defline:  (1 of 1) PTHR11638:SF124 - DOUBLE CLP-N MOTIF PROTEIN Genomic Order:  2402
Name:  ? Phvul.009G235300 Secondary Identifier:  ? PAC:37149919
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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.009G235300 0.5kb upstream 0.5kb upstream 5023 true Chr09: 35274527-35279549 Phaseolus vulgaris
Phvul.009G235300 0.5kb upstream 0.5kb upstream 500 false Chr09: 35279050-35279549 Phaseolus vulgaris
Phvul.009G235300 0.5kb downstream 0.5kb downstream 5023 true Chr09: 35274027-35279049 Phaseolus vulgaris
Phvul.009G235300 0.5kb downstream 0.5kb downstream 500 false Chr09: 35274027-35274526 Phaseolus vulgaris
Phvul.009G235300 1.0kb upstream 1.0kb upstream 5523 true Chr09: 35274527-35280049 Phaseolus vulgaris
Phvul.009G235300 1.0kb upstream 1.0kb upstream 1000 false Chr09: 35279050-35280049 Phaseolus vulgaris
Phvul.009G235300 1.0kb downstream 1.0kb downstream 5523 true Chr09: 35273527-35279049 Phaseolus vulgaris
Phvul.009G235300 1.0kb downstream 1.0kb downstream 1000 false Chr09: 35273527-35274526 Phaseolus vulgaris
Phvul.009G235300 2.0kb upstream 2.0kb upstream 6523 true Chr09: 35274527-35281049 Phaseolus vulgaris
Phvul.009G235300 2.0kb upstream 2.0kb upstream 2000 false Chr09: 35279050-35281049 Phaseolus vulgaris
Phvul.009G235300 2.0kb downstream 2.0kb downstream 6523 true Chr09: 35272527-35279049 Phaseolus vulgaris
Phvul.009G235300 2.0kb downstream 2.0kb downstream 2000 false Chr09: 35272527-35274526 Phaseolus vulgaris
Phvul.009G235300 5.0kb upstream 5.0kb upstream 9523 true Chr09: 35274527-35284049 Phaseolus vulgaris
Phvul.009G235300 5.0kb upstream 5.0kb upstream 5000 false Chr09: 35279050-35284049 Phaseolus vulgaris
Phvul.009G235300 5.0kb downstream 5.0kb downstream 9523 true Chr09: 35269527-35279049 Phaseolus vulgaris
Phvul.009G235300 5.0kb downstream 5.0kb downstream 5000 false Chr09: 35269527-35274526 Phaseolus vulgaris
Phvul.009G235300 10.0kb upstream 10.0kb upstream 14523 true Chr09: 35274527-35289049 Phaseolus vulgaris
Phvul.009G235300 10.0kb upstream 10.0kb upstream 10000 false Chr09: 35279050-35289049 Phaseolus vulgaris
Phvul.009G235300 10.0kb downstream 10.0kb downstream 14523 true Chr09: 35264527-35279049 Phaseolus vulgaris
Phvul.009G235300 10.0kb downstream 10.0kb downstream 10000 false Chr09: 35264527-35274526 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122303123 5265 Fabidae View MSA
124066175 5270 Rosid View MSA
123751294 5271 Pentapetalae View MSA
122791347 5272 Eudicot View MSA
122049419 5273 Angiosperm View MSA
121351273 5274 Embryophyte View MSA
123382090 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.3036 0.0 3.94847    
cufflinks 4.84971 0.0 12.8904    
cufflinks 1.05532 0.0 3.25212    
cufflinks 0.752186 0.0 2.43843   Low
cufflinks 10.8318 0.0 27.9991    
cufflinks 6.34509 0.0 16.5897    
cufflinks 14.3727 0.0 37.3635   High
cufflinks 5.39202 0.0 14.2018    
cufflinks 11.2345 0.0 29.0504    
cufflinks 0.245371 0.0 0.890803 Low Low
cufflinks 11.6445 0.0 30.107    

0 Strain