Gene : Phvul.008G114500 P. vulgaris v2.1
Defline:  (1 of 10) PF04759 - Protein of unknown function, DUF617 (DUF617) Genomic Order:  1123
Name:  ? Phvul.008G114500 Secondary Identifier:  ? PAC:37159644
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Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.008G114500 0.5kb upstream 0.5kb upstream 1611 true Chr08: 13489196-13490806 Phaseolus vulgaris
Phvul.008G114500 0.5kb upstream 0.5kb upstream 500 false Chr08: 13490307-13490806 Phaseolus vulgaris
Phvul.008G114500 0.5kb downstream 0.5kb downstream 1611 true Chr08: 13488696-13490306 Phaseolus vulgaris
Phvul.008G114500 0.5kb downstream 0.5kb downstream 500 false Chr08: 13488696-13489195 Phaseolus vulgaris
Phvul.008G114500 1.0kb upstream 1.0kb upstream 2111 true Chr08: 13489196-13491306 Phaseolus vulgaris
Phvul.008G114500 1.0kb upstream 1.0kb upstream 1000 false Chr08: 13490307-13491306 Phaseolus vulgaris
Phvul.008G114500 1.0kb downstream 1.0kb downstream 2111 true Chr08: 13488196-13490306 Phaseolus vulgaris
Phvul.008G114500 1.0kb downstream 1.0kb downstream 1000 false Chr08: 13488196-13489195 Phaseolus vulgaris
Phvul.008G114500 2.0kb upstream 2.0kb upstream 3111 true Chr08: 13489196-13492306 Phaseolus vulgaris
Phvul.008G114500 2.0kb upstream 2.0kb upstream 2000 false Chr08: 13490307-13492306 Phaseolus vulgaris
Phvul.008G114500 2.0kb downstream 2.0kb downstream 3111 true Chr08: 13487196-13490306 Phaseolus vulgaris
Phvul.008G114500 2.0kb downstream 2.0kb downstream 2000 false Chr08: 13487196-13489195 Phaseolus vulgaris
Phvul.008G114500 5.0kb upstream 5.0kb upstream 6111 true Chr08: 13489196-13495306 Phaseolus vulgaris
Phvul.008G114500 5.0kb upstream 5.0kb upstream 5000 false Chr08: 13490307-13495306 Phaseolus vulgaris
Phvul.008G114500 5.0kb downstream 5.0kb downstream 6111 true Chr08: 13484196-13490306 Phaseolus vulgaris
Phvul.008G114500 5.0kb downstream 5.0kb downstream 5000 false Chr08: 13484196-13489195 Phaseolus vulgaris
Phvul.008G114500 10.0kb upstream 10.0kb upstream 11111 true Chr08: 13489196-13500306 Phaseolus vulgaris
Phvul.008G114500 10.0kb upstream 10.0kb upstream 10000 false Chr08: 13490307-13500306 Phaseolus vulgaris
Phvul.008G114500 10.0kb downstream 10.0kb downstream 11111 true Chr08: 13479196-13490306 Phaseolus vulgaris
Phvul.008G114500 10.0kb downstream 10.0kb downstream 10000 false Chr08: 13479196-13489195 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122299985 5265 Fabidae View MSA
124068431 5270 Rosid View MSA
123751387 5271 Pentapetalae View MSA
122796767 5272 Eudicot View MSA
122047033 5273 Angiosperm View MSA
121349765 5274 Embryophyte View MSA
123381434 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.279178 0.0 1.1312 Low  
cufflinks 0.034984 0.0 0.174732 Low Low
cufflinks 0.137119 0.0 0.597631 Low  
cufflinks 5.54525 0.0 16.5149   High
cufflinks 1.92408 0.0 6.49853    
cufflinks 1.22134 0.0 4.42095    
cufflinks 0.627675 0.0 2.37714    
cufflinks 0.0943105 0.0 0.424765 Low Low
cufflinks 2.33134 0.0 7.79515    
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 1.51235 0.0 5.29038    

0 Strain