Gene : Phvul.008G114700 P. vulgaris v2.1
Defline:  (1 of 1) PTHR12859 - PRA1 PROTEIN Genomic Order:  1125
Name:  ? Phvul.008G114700 Secondary Identifier:  ? PAC:37160643
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.008G114700 0.5kb upstream 0.5kb upstream 5781 true Chr08: 13509963-13515743 Phaseolus vulgaris
Phvul.008G114700 0.5kb upstream 0.5kb upstream 500 false Chr08: 13509963-13510462 Phaseolus vulgaris
Phvul.008G114700 0.5kb downstream 0.5kb downstream 5781 true Chr08: 13510463-13516243 Phaseolus vulgaris
Phvul.008G114700 0.5kb downstream 0.5kb downstream 500 false Chr08: 13515744-13516243 Phaseolus vulgaris
Phvul.008G114700 1.0kb upstream 1.0kb upstream 6281 true Chr08: 13509463-13515743 Phaseolus vulgaris
Phvul.008G114700 1.0kb upstream 1.0kb upstream 1000 false Chr08: 13509463-13510462 Phaseolus vulgaris
Phvul.008G114700 1.0kb downstream 1.0kb downstream 6281 true Chr08: 13510463-13516743 Phaseolus vulgaris
Phvul.008G114700 1.0kb downstream 1.0kb downstream 1000 false Chr08: 13515744-13516743 Phaseolus vulgaris
Phvul.008G114700 2.0kb upstream 2.0kb upstream 7281 true Chr08: 13508463-13515743 Phaseolus vulgaris
Phvul.008G114700 2.0kb upstream 2.0kb upstream 2000 false Chr08: 13508463-13510462 Phaseolus vulgaris
Phvul.008G114700 2.0kb downstream 2.0kb downstream 7281 true Chr08: 13510463-13517743 Phaseolus vulgaris
Phvul.008G114700 2.0kb downstream 2.0kb downstream 2000 false Chr08: 13515744-13517743 Phaseolus vulgaris
Phvul.008G114700 5.0kb upstream 5.0kb upstream 10281 true Chr08: 13505463-13515743 Phaseolus vulgaris
Phvul.008G114700 5.0kb upstream 5.0kb upstream 5000 false Chr08: 13505463-13510462 Phaseolus vulgaris
Phvul.008G114700 5.0kb downstream 5.0kb downstream 10281 true Chr08: 13510463-13520743 Phaseolus vulgaris
Phvul.008G114700 5.0kb downstream 5.0kb downstream 5000 false Chr08: 13515744-13520743 Phaseolus vulgaris
Phvul.008G114700 10.0kb upstream 10.0kb upstream 15281 true Chr08: 13500463-13515743 Phaseolus vulgaris
Phvul.008G114700 10.0kb upstream 10.0kb upstream 10000 false Chr08: 13500463-13510462 Phaseolus vulgaris
Phvul.008G114700 10.0kb downstream 10.0kb downstream 15281 true Chr08: 13510463-13525743 Phaseolus vulgaris
Phvul.008G114700 10.0kb downstream 10.0kb downstream 10000 false Chr08: 13515744-13525743 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041278 5273 Angiosperm View MSA
122300281 5265 Fabidae View MSA
124062256 5270 Rosid View MSA
123752412 5271 Pentapetalae View MSA
122788524 5272 Eudicot View MSA
121345712 5274 Embryophyte View MSA
123428225 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 62.2391 0.0 161.341 High High
cufflinks 35.599 0.0 92.4588 High  
cufflinks 34.9245 0.0 90.6727    
cufflinks 63.2868 0.0 164.054 High High
cufflinks 38.5731 0.0 99.9579 High  
cufflinks 30.1431 0.0 78.8173   Low
cufflinks 35.3341 0.0 91.8442 High  
cufflinks 32.8942 0.0 85.571 High  
cufflinks 45.0067 0.0 116.453 High  
cufflinks 45.3117 0.0 117.146 High  
cufflinks 44.1536 0.0 114.209 High  

0 Strain