Gene : Phvul.008G114200 P. vulgaris v2.1
Defline:  (1 of 2) PTHR11654:SF79 - PROTEIN NRT1/ PTR FAMILY 5.5-RELATED Genomic Order:  1120
Name:  ? Phvul.008G114200 Secondary Identifier:  ? PAC:37161128
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0 Pathways

Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.008G114200 0.5kb upstream 0.5kb upstream 7521 true Chr08: 13354218-13361738 Phaseolus vulgaris
Phvul.008G114200 0.5kb upstream 0.5kb upstream 500 false Chr08: 13354218-13354717 Phaseolus vulgaris
Phvul.008G114200 0.5kb downstream 0.5kb downstream 7521 true Chr08: 13354718-13362238 Phaseolus vulgaris
Phvul.008G114200 0.5kb downstream 0.5kb downstream 500 false Chr08: 13361739-13362238 Phaseolus vulgaris
Phvul.008G114200 1.0kb upstream 1.0kb upstream 8021 true Chr08: 13353718-13361738 Phaseolus vulgaris
Phvul.008G114200 1.0kb upstream 1.0kb upstream 1000 false Chr08: 13353718-13354717 Phaseolus vulgaris
Phvul.008G114200 1.0kb downstream 1.0kb downstream 8021 true Chr08: 13354718-13362738 Phaseolus vulgaris
Phvul.008G114200 1.0kb downstream 1.0kb downstream 1000 false Chr08: 13361739-13362738 Phaseolus vulgaris
Phvul.008G114200 2.0kb upstream 2.0kb upstream 9021 true Chr08: 13352718-13361738 Phaseolus vulgaris
Phvul.008G114200 2.0kb upstream 2.0kb upstream 2000 false Chr08: 13352718-13354717 Phaseolus vulgaris
Phvul.008G114200 2.0kb downstream 2.0kb downstream 9021 true Chr08: 13354718-13363738 Phaseolus vulgaris
Phvul.008G114200 2.0kb downstream 2.0kb downstream 2000 false Chr08: 13361739-13363738 Phaseolus vulgaris
Phvul.008G114200 5.0kb upstream 5.0kb upstream 12021 true Chr08: 13349718-13361738 Phaseolus vulgaris
Phvul.008G114200 5.0kb upstream 5.0kb upstream 5000 false Chr08: 13349718-13354717 Phaseolus vulgaris
Phvul.008G114200 5.0kb downstream 5.0kb downstream 12021 true Chr08: 13354718-13366738 Phaseolus vulgaris
Phvul.008G114200 5.0kb downstream 5.0kb downstream 5000 false Chr08: 13361739-13366738 Phaseolus vulgaris
Phvul.008G114200 10.0kb upstream 10.0kb upstream 17021 true Chr08: 13344718-13361738 Phaseolus vulgaris
Phvul.008G114200 10.0kb upstream 10.0kb upstream 10000 false Chr08: 13344718-13354717 Phaseolus vulgaris
Phvul.008G114200 10.0kb downstream 10.0kb downstream 17021 true Chr08: 13354718-13371738 Phaseolus vulgaris
Phvul.008G114200 10.0kb downstream 10.0kb downstream 10000 false Chr08: 13361739-13371738 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122309877 5265 Fabidae View MSA
124072261 5270 Rosid View MSA
123752034 5271 Pentapetalae View MSA
122791264 5272 Eudicot View MSA
122045337 5273 Angiosperm View MSA
121350655 5274 Embryophyte View MSA
123428779 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.53521 0.0 13.429    
cufflinks 4.6783 0.0 16.5414    
cufflinks 5.63365 0.0 18.446    
cufflinks 2.4863 0.0 7.99745    
cufflinks 21.5609 0.0 70.2714   High
cufflinks 1.77979 0.0 8.06542    
cufflinks 2.73182 0.0 11.2497    
cufflinks 0.906457 0.0 3.74933   Low
cufflinks 2.2627 0.0 7.49833    
cufflinks 2.99517 0.0 12.4382    
cufflinks 14.9806 0.0 50.3819   High

0 Strain