Gene : Phvul.008G115100 P. vulgaris v2.1
Defline:  (1 of 2) 1.2.1.41//2.7.2.11 - Glutamate-5-semialdehyde dehydrogenase / Glutamyl-gamma-semialdehyde dehydrogenase // Glutamate 5-kinase / Gamma-glutamyl kinase Genomic Order:  1131
Name:  ? Phvul.008G115100 Secondary Identifier:  ? PAC:37159843
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Sequence Feature Displayer

Ontology Annotation Displayer

5 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Pvulgaris ARGININE-SYN4-PWY Phaseolus vulgaris pathologic  
Pvulgaris CITRULBIO-PWY Phaseolus vulgaris pathologic  
Pvulgaris PROSYN-PWY Phaseolus vulgaris pathologic  
Pvulgaris PWY-3341 Phaseolus vulgaris pathologic  
Pvulgaris PWY-6922 Phaseolus vulgaris pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.008G115100 0.5kb upstream 0.5kb upstream 9030 true Chr08: 13619211-13628240 Phaseolus vulgaris
Phvul.008G115100 0.5kb upstream 0.5kb upstream 500 false Chr08: 13619211-13619710 Phaseolus vulgaris
Phvul.008G115100 0.5kb downstream 0.5kb downstream 9030 true Chr08: 13619711-13628740 Phaseolus vulgaris
Phvul.008G115100 0.5kb downstream 0.5kb downstream 500 false Chr08: 13628241-13628740 Phaseolus vulgaris
Phvul.008G115100 1.0kb upstream 1.0kb upstream 9530 true Chr08: 13618711-13628240 Phaseolus vulgaris
Phvul.008G115100 1.0kb upstream 1.0kb upstream 1000 false Chr08: 13618711-13619710 Phaseolus vulgaris
Phvul.008G115100 1.0kb downstream 1.0kb downstream 9530 true Chr08: 13619711-13629240 Phaseolus vulgaris
Phvul.008G115100 1.0kb downstream 1.0kb downstream 1000 false Chr08: 13628241-13629240 Phaseolus vulgaris
Phvul.008G115100 2.0kb upstream 2.0kb upstream 10530 true Chr08: 13617711-13628240 Phaseolus vulgaris
Phvul.008G115100 2.0kb upstream 2.0kb upstream 2000 false Chr08: 13617711-13619710 Phaseolus vulgaris
Phvul.008G115100 2.0kb downstream 2.0kb downstream 10530 true Chr08: 13619711-13630240 Phaseolus vulgaris
Phvul.008G115100 2.0kb downstream 2.0kb downstream 2000 false Chr08: 13628241-13630240 Phaseolus vulgaris
Phvul.008G115100 5.0kb upstream 5.0kb upstream 13530 true Chr08: 13614711-13628240 Phaseolus vulgaris
Phvul.008G115100 5.0kb upstream 5.0kb upstream 5000 false Chr08: 13614711-13619710 Phaseolus vulgaris
Phvul.008G115100 5.0kb downstream 5.0kb downstream 13530 true Chr08: 13619711-13633240 Phaseolus vulgaris
Phvul.008G115100 5.0kb downstream 5.0kb downstream 5000 false Chr08: 13628241-13633240 Phaseolus vulgaris
Phvul.008G115100 10.0kb upstream 10.0kb upstream 18530 true Chr08: 13609711-13628240 Phaseolus vulgaris
Phvul.008G115100 10.0kb upstream 10.0kb upstream 10000 false Chr08: 13609711-13619710 Phaseolus vulgaris
Phvul.008G115100 10.0kb downstream 10.0kb downstream 18530 true Chr08: 13619711-13638240 Phaseolus vulgaris
Phvul.008G115100 10.0kb downstream 10.0kb downstream 10000 false Chr08: 13628241-13638240 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122309637 5265 Fabidae View MSA
124064973 5270 Rosid View MSA
123744591 5271 Pentapetalae View MSA
122786608 5272 Eudicot View MSA
122047433 5273 Angiosperm View MSA
121343806 5274 Embryophyte View MSA
123427959 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0381158 0.0 0.168485 Low Low
cufflinks 0.311267 0.0 1.15491 Low  
cufflinks 0.54651 0.0 1.92165 Low  
cufflinks 0.535543 0.0 1.90624 Low  
cufflinks 0.741395 0.0 2.54409   High
cufflinks 0.395451 0.0 1.43675 Low  
cufflinks 0.0725517 0.0 0.302869 Low Low
cufflinks 0.124026 0.0 0.494096 Low  
cufflinks 0.239411 0.0 0.910311 Low  
cufflinks 0.127676 0.0 0.508925 Low  
cufflinks 0.387902 0.0 1.41829 Low  

0 Strain