Gene : Phvul.008G117600 P. vulgaris v2.1
Defline:  (1 of 15) PF11961 - Domain of unknown function (DUF3475) (DUF3475) Genomic Order:  1155
Name:  ? Phvul.008G117600 Secondary Identifier:  ? PAC:37161192
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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.008G117600 0.5kb upstream 0.5kb upstream 2218 true Chr08: 14349657-14351874 Phaseolus vulgaris
Phvul.008G117600 0.5kb upstream 0.5kb upstream 500 false Chr08: 14349657-14350156 Phaseolus vulgaris
Phvul.008G117600 0.5kb downstream 0.5kb downstream 2218 true Chr08: 14350157-14352374 Phaseolus vulgaris
Phvul.008G117600 0.5kb downstream 0.5kb downstream 500 false Chr08: 14351875-14352374 Phaseolus vulgaris
Phvul.008G117600 1.0kb upstream 1.0kb upstream 2718 true Chr08: 14349157-14351874 Phaseolus vulgaris
Phvul.008G117600 1.0kb upstream 1.0kb upstream 1000 false Chr08: 14349157-14350156 Phaseolus vulgaris
Phvul.008G117600 1.0kb downstream 1.0kb downstream 2718 true Chr08: 14350157-14352874 Phaseolus vulgaris
Phvul.008G117600 1.0kb downstream 1.0kb downstream 1000 false Chr08: 14351875-14352874 Phaseolus vulgaris
Phvul.008G117600 2.0kb upstream 2.0kb upstream 3718 true Chr08: 14348157-14351874 Phaseolus vulgaris
Phvul.008G117600 2.0kb upstream 2.0kb upstream 2000 false Chr08: 14348157-14350156 Phaseolus vulgaris
Phvul.008G117600 2.0kb downstream 2.0kb downstream 3718 true Chr08: 14350157-14353874 Phaseolus vulgaris
Phvul.008G117600 2.0kb downstream 2.0kb downstream 2000 false Chr08: 14351875-14353874 Phaseolus vulgaris
Phvul.008G117600 5.0kb upstream 5.0kb upstream 6718 true Chr08: 14345157-14351874 Phaseolus vulgaris
Phvul.008G117600 5.0kb upstream 5.0kb upstream 5000 false Chr08: 14345157-14350156 Phaseolus vulgaris
Phvul.008G117600 5.0kb downstream 5.0kb downstream 6718 true Chr08: 14350157-14356874 Phaseolus vulgaris
Phvul.008G117600 5.0kb downstream 5.0kb downstream 5000 false Chr08: 14351875-14356874 Phaseolus vulgaris
Phvul.008G117600 10.0kb upstream 10.0kb upstream 11718 true Chr08: 14340157-14351874 Phaseolus vulgaris
Phvul.008G117600 10.0kb upstream 10.0kb upstream 10000 false Chr08: 14340157-14350156 Phaseolus vulgaris
Phvul.008G117600 10.0kb downstream 10.0kb downstream 11718 true Chr08: 14350157-14361874 Phaseolus vulgaris
Phvul.008G117600 10.0kb downstream 10.0kb downstream 10000 false Chr08: 14351875-14361874 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121655858 5273 Angiosperm View MSA
122296545 5265 Fabidae View MSA
124035696 5270 Rosid View MSA
123609176 5271 Pentapetalae View MSA
122643826 5272 Eudicot View MSA
120927956 5274 Embryophyte View MSA
122968596 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.17851 0.0 6.64238    
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 1.99091 0.0 6.1064    
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 1.63209 0.0 5.07889    
cufflinks 9.8446 0.0 25.9843    
cufflinks 0.0311434 0.0 0.140721 Low Low
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed

0 Strain