Gene : Phvul.008G118400 P. vulgaris v2.1
Defline:  (1 of 2) PTHR31384:SF1 - AUXIN RESPONSE FACTOR 12-RELATED Genomic Order:  1163
Name:  ? Phvul.008G118400 Secondary Identifier:  ? PAC:37158739
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0 Pathways

Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.008G118400 0.5kb upstream 0.5kb upstream 5519 true Chr08: 14497509-14503027 Phaseolus vulgaris
Phvul.008G118400 0.5kb upstream 0.5kb upstream 500 false Chr08: 14502528-14503027 Phaseolus vulgaris
Phvul.008G118400 0.5kb downstream 0.5kb downstream 5519 true Chr08: 14497009-14502527 Phaseolus vulgaris
Phvul.008G118400 0.5kb downstream 0.5kb downstream 500 false Chr08: 14497009-14497508 Phaseolus vulgaris
Phvul.008G118400 1.0kb upstream 1.0kb upstream 6019 true Chr08: 14497509-14503527 Phaseolus vulgaris
Phvul.008G118400 1.0kb upstream 1.0kb upstream 1000 false Chr08: 14502528-14503527 Phaseolus vulgaris
Phvul.008G118400 1.0kb downstream 1.0kb downstream 6019 true Chr08: 14496509-14502527 Phaseolus vulgaris
Phvul.008G118400 1.0kb downstream 1.0kb downstream 1000 false Chr08: 14496509-14497508 Phaseolus vulgaris
Phvul.008G118400 2.0kb upstream 2.0kb upstream 7019 true Chr08: 14497509-14504527 Phaseolus vulgaris
Phvul.008G118400 2.0kb upstream 2.0kb upstream 2000 false Chr08: 14502528-14504527 Phaseolus vulgaris
Phvul.008G118400 2.0kb downstream 2.0kb downstream 7019 true Chr08: 14495509-14502527 Phaseolus vulgaris
Phvul.008G118400 2.0kb downstream 2.0kb downstream 2000 false Chr08: 14495509-14497508 Phaseolus vulgaris
Phvul.008G118400 5.0kb upstream 5.0kb upstream 10019 true Chr08: 14497509-14507527 Phaseolus vulgaris
Phvul.008G118400 5.0kb upstream 5.0kb upstream 5000 false Chr08: 14502528-14507527 Phaseolus vulgaris
Phvul.008G118400 5.0kb downstream 5.0kb downstream 10019 true Chr08: 14492509-14502527 Phaseolus vulgaris
Phvul.008G118400 5.0kb downstream 5.0kb downstream 5000 false Chr08: 14492509-14497508 Phaseolus vulgaris
Phvul.008G118400 10.0kb upstream 10.0kb upstream 15019 true Chr08: 14497509-14512527 Phaseolus vulgaris
Phvul.008G118400 10.0kb upstream 10.0kb upstream 10000 false Chr08: 14502528-14512527 Phaseolus vulgaris
Phvul.008G118400 10.0kb downstream 10.0kb downstream 15019 true Chr08: 14487509-14502527 Phaseolus vulgaris
Phvul.008G118400 10.0kb downstream 10.0kb downstream 10000 false Chr08: 14487509-14497508 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122314048 5265 Fabidae View MSA
124070371 5270 Rosid View MSA
123743990 5271 Pentapetalae View MSA
122792006 5272 Eudicot View MSA
122050868 5273 Angiosperm View MSA
121348224 5274 Embryophyte View MSA
123380779 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 9.55781 0.0 25.1364    
cufflinks 16.3445 0.0 42.2555   High
cufflinks 3.96943 0.0 11.1679    
cufflinks 1.95547 0.0 5.98903   Low
cufflinks 5.52195 0.0 15.1891    
cufflinks 16.6026 0.0 42.9188   High
cufflinks 13.4449 0.0 34.84    
cufflinks 4.84451 0.0 13.3801    
cufflinks 18.7736 0.0 48.5433   High
cufflinks 6.50817 0.0 17.602    
cufflinks 8.97279 0.0 23.7287    

0 Strain