Gene : Phvul.008G122400 P. vulgaris v2.1
Defline:  (1 of 1) PTHR27008:SF28 - KINASE-LIKE PROTEIN TMKL1-RELATED Genomic Order:  1239
Name:  ? Phvul.008G122400 Secondary Identifier:  ? PAC:37157892
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.008G122400 0.5kb upstream 0.5kb upstream 3744 true Chr08: 17352547-17356290 Phaseolus vulgaris
Phvul.008G122400 0.5kb upstream 0.5kb upstream 500 false Chr08: 17355791-17356290 Phaseolus vulgaris
Phvul.008G122400 0.5kb downstream 0.5kb downstream 3744 true Chr08: 17352047-17355790 Phaseolus vulgaris
Phvul.008G122400 0.5kb downstream 0.5kb downstream 500 false Chr08: 17352047-17352546 Phaseolus vulgaris
Phvul.008G122400 1.0kb upstream 1.0kb upstream 4244 true Chr08: 17352547-17356790 Phaseolus vulgaris
Phvul.008G122400 1.0kb upstream 1.0kb upstream 1000 false Chr08: 17355791-17356790 Phaseolus vulgaris
Phvul.008G122400 1.0kb downstream 1.0kb downstream 4244 true Chr08: 17351547-17355790 Phaseolus vulgaris
Phvul.008G122400 1.0kb downstream 1.0kb downstream 1000 false Chr08: 17351547-17352546 Phaseolus vulgaris
Phvul.008G122400 2.0kb upstream 2.0kb upstream 5244 true Chr08: 17352547-17357790 Phaseolus vulgaris
Phvul.008G122400 2.0kb upstream 2.0kb upstream 2000 false Chr08: 17355791-17357790 Phaseolus vulgaris
Phvul.008G122400 2.0kb downstream 2.0kb downstream 5244 true Chr08: 17350547-17355790 Phaseolus vulgaris
Phvul.008G122400 2.0kb downstream 2.0kb downstream 2000 false Chr08: 17350547-17352546 Phaseolus vulgaris
Phvul.008G122400 5.0kb upstream 5.0kb upstream 8244 true Chr08: 17352547-17360790 Phaseolus vulgaris
Phvul.008G122400 5.0kb upstream 5.0kb upstream 5000 false Chr08: 17355791-17360790 Phaseolus vulgaris
Phvul.008G122400 5.0kb downstream 5.0kb downstream 8244 true Chr08: 17347547-17355790 Phaseolus vulgaris
Phvul.008G122400 5.0kb downstream 5.0kb downstream 5000 false Chr08: 17347547-17352546 Phaseolus vulgaris
Phvul.008G122400 10.0kb upstream 10.0kb upstream 13244 true Chr08: 17352547-17365790 Phaseolus vulgaris
Phvul.008G122400 10.0kb upstream 10.0kb upstream 10000 false Chr08: 17355791-17365790 Phaseolus vulgaris
Phvul.008G122400 10.0kb downstream 10.0kb downstream 13244 true Chr08: 17342547-17355790 Phaseolus vulgaris
Phvul.008G122400 10.0kb downstream 10.0kb downstream 10000 false Chr08: 17342547-17352546 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122303321 5265 Fabidae View MSA
124060679 5270 Rosid View MSA
123737140 5271 Pentapetalae View MSA
122786867 5272 Eudicot View MSA
122044440 5273 Angiosperm View MSA
121348994 5274 Embryophyte View MSA
123381116 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 5.7386 0.0 20.9466    
cufflinks 15.0608 0.0 48.9043   High
cufflinks 1.08752 0.0 3.71966   Low
cufflinks 4.02152 0.0 13.4209    
cufflinks 11.2173 0.0 36.634    
cufflinks 7.37973 0.0 25.6743    
cufflinks 8.3274 0.0 28.305    
cufflinks 4.37621 0.0 16.5765    
cufflinks 6.28263 0.0 22.5474    
cufflinks 3.20476 0.0 13.0827    
cufflinks 17.1394 0.0 55.0103   High

0 Strain