Gene : Phvul.008G119100 P. vulgaris v2.1
Defline:  (1 of 2) PTHR37723:SF1 - FHL-3 Genomic Order:  1170
Name:  ? Phvul.008G119100 Secondary Identifier:  ? PAC:37159290
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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Cufflinks Score Displayer

 

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.008G119100 0.5kb upstream 0.5kb upstream 4039 true Chr08: 14665829-14669867 Phaseolus vulgaris
Phvul.008G119100 0.5kb upstream 0.5kb upstream 500 false Chr08: 14665829-14666328 Phaseolus vulgaris
Phvul.008G119100 0.5kb downstream 0.5kb downstream 4039 true Chr08: 14666329-14670367 Phaseolus vulgaris
Phvul.008G119100 0.5kb downstream 0.5kb downstream 500 false Chr08: 14669868-14670367 Phaseolus vulgaris
Phvul.008G119100 1.0kb upstream 1.0kb upstream 4539 true Chr08: 14665329-14669867 Phaseolus vulgaris
Phvul.008G119100 1.0kb upstream 1.0kb upstream 1000 false Chr08: 14665329-14666328 Phaseolus vulgaris
Phvul.008G119100 1.0kb downstream 1.0kb downstream 4539 true Chr08: 14666329-14670867 Phaseolus vulgaris
Phvul.008G119100 1.0kb downstream 1.0kb downstream 1000 false Chr08: 14669868-14670867 Phaseolus vulgaris
Phvul.008G119100 2.0kb upstream 2.0kb upstream 5539 true Chr08: 14664329-14669867 Phaseolus vulgaris
Phvul.008G119100 2.0kb upstream 2.0kb upstream 2000 false Chr08: 14664329-14666328 Phaseolus vulgaris
Phvul.008G119100 2.0kb downstream 2.0kb downstream 5539 true Chr08: 14666329-14671867 Phaseolus vulgaris
Phvul.008G119100 2.0kb downstream 2.0kb downstream 2000 false Chr08: 14669868-14671867 Phaseolus vulgaris
Phvul.008G119100 5.0kb upstream 5.0kb upstream 8539 true Chr08: 14661329-14669867 Phaseolus vulgaris
Phvul.008G119100 5.0kb upstream 5.0kb upstream 5000 false Chr08: 14661329-14666328 Phaseolus vulgaris
Phvul.008G119100 5.0kb downstream 5.0kb downstream 8539 true Chr08: 14666329-14674867 Phaseolus vulgaris
Phvul.008G119100 5.0kb downstream 5.0kb downstream 5000 false Chr08: 14669868-14674867 Phaseolus vulgaris
Phvul.008G119100 10.0kb upstream 10.0kb upstream 13539 true Chr08: 14656329-14669867 Phaseolus vulgaris
Phvul.008G119100 10.0kb upstream 10.0kb upstream 10000 false Chr08: 14656329-14666328 Phaseolus vulgaris
Phvul.008G119100 10.0kb downstream 10.0kb downstream 13539 true Chr08: 14666329-14679867 Phaseolus vulgaris
Phvul.008G119100 10.0kb downstream 10.0kb downstream 10000 false Chr08: 14669868-14679867 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121791914 5273 Angiosperm View MSA
122301769 5265 Fabidae View MSA
124070784 5270 Rosid View MSA
123746166 5271 Pentapetalae View MSA
122795270 5272 Eudicot View MSA
121063183 5274 Embryophyte View MSA
123102954 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 4.85682 0.0 14.9616    
cufflinks 4.38814 0.0 13.6831    
cufflinks 1.04814 0.0 3.8038   Low
cufflinks 6.16327 0.0 18.6698   High
cufflinks 1.7116 0.0 6.00205    
cufflinks 2.50498 0.0 8.31064    
cufflinks 1.73208 0.0 5.99799    
cufflinks 3.64687 0.0 11.5268    
cufflinks 1.30246 0.0 4.65029   Low
cufflinks 3.78842 0.0 12.0487    
cufflinks 3.61319 0.0 11.6079    

0 Strain