Gene : Phvul.008G125300 P. vulgaris v2.1
Defline:  (1 of 7) KOG4249 - Uncharacterized conserved protein Genomic Order:  1283
Name:  ? Phvul.008G125300 Secondary Identifier:  ? PAC:37158084
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.008G125300 0.5kb upstream 0.5kb upstream 4790 true Chr08: 19355942-19360731 Phaseolus vulgaris
Phvul.008G125300 0.5kb upstream 0.5kb upstream 500 false Chr08: 19355942-19356441 Phaseolus vulgaris
Phvul.008G125300 0.5kb downstream 0.5kb downstream 4790 true Chr08: 19356442-19361231 Phaseolus vulgaris
Phvul.008G125300 0.5kb downstream 0.5kb downstream 500 false Chr08: 19360732-19361231 Phaseolus vulgaris
Phvul.008G125300 1.0kb upstream 1.0kb upstream 5290 true Chr08: 19355442-19360731 Phaseolus vulgaris
Phvul.008G125300 1.0kb upstream 1.0kb upstream 1000 false Chr08: 19355442-19356441 Phaseolus vulgaris
Phvul.008G125300 1.0kb downstream 1.0kb downstream 5290 true Chr08: 19356442-19361731 Phaseolus vulgaris
Phvul.008G125300 1.0kb downstream 1.0kb downstream 1000 false Chr08: 19360732-19361731 Phaseolus vulgaris
Phvul.008G125300 2.0kb upstream 2.0kb upstream 6290 true Chr08: 19354442-19360731 Phaseolus vulgaris
Phvul.008G125300 2.0kb upstream 2.0kb upstream 2000 false Chr08: 19354442-19356441 Phaseolus vulgaris
Phvul.008G125300 2.0kb downstream 2.0kb downstream 6290 true Chr08: 19356442-19362731 Phaseolus vulgaris
Phvul.008G125300 2.0kb downstream 2.0kb downstream 2000 false Chr08: 19360732-19362731 Phaseolus vulgaris
Phvul.008G125300 5.0kb upstream 5.0kb upstream 9290 true Chr08: 19351442-19360731 Phaseolus vulgaris
Phvul.008G125300 5.0kb upstream 5.0kb upstream 5000 false Chr08: 19351442-19356441 Phaseolus vulgaris
Phvul.008G125300 5.0kb downstream 5.0kb downstream 9290 true Chr08: 19356442-19365731 Phaseolus vulgaris
Phvul.008G125300 5.0kb downstream 5.0kb downstream 5000 false Chr08: 19360732-19365731 Phaseolus vulgaris
Phvul.008G125300 10.0kb upstream 10.0kb upstream 14290 true Chr08: 19346442-19360731 Phaseolus vulgaris
Phvul.008G125300 10.0kb upstream 10.0kb upstream 10000 false Chr08: 19346442-19356441 Phaseolus vulgaris
Phvul.008G125300 10.0kb downstream 10.0kb downstream 14290 true Chr08: 19356442-19370731 Phaseolus vulgaris
Phvul.008G125300 10.0kb downstream 10.0kb downstream 10000 false Chr08: 19360732-19370731 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122306325 5265 Fabidae View MSA
124067198 5270 Rosid View MSA
123740356 5271 Pentapetalae View MSA
122792497 5272 Eudicot View MSA
122041565 5273 Angiosperm View MSA
121347717 5274 Embryophyte View MSA
123428813 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.92192 0.0 14.4179    
cufflinks 2.78086 0.0 11.3585   Low
cufflinks 6.39817 0.0 20.9588    
cufflinks 3.03085 0.0 12.2509   Low
cufflinks 4.67666 0.0 16.4813    
cufflinks 4.03737 0.0 14.7087    
cufflinks 6.0226 0.0 20.0243    
cufflinks 7.96464 0.0 25.0231   High
cufflinks 4.99074 0.0 17.3784    
cufflinks 6.41849 0.0 21.0236    
cufflinks 3.14155 0.0 12.2422   Low

0 Strain