Gene : Phvul.008G125000 P. vulgaris v2.1
Defline:  (1 of 1) PTHR23051//PTHR23051:SF1 - SOLUTE CARRIER FAMILY 35, MEMBER F5 // SUBFAMILY NOT NAMED Genomic Order:  1286
Name:  ? Phvul.008G125000 Secondary Identifier:  ? PAC:37160487
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.008G125000 0.5kb upstream 0.5kb upstream 6935 true Chr08: 19375604-19382538 Phaseolus vulgaris
Phvul.008G125000 0.5kb upstream 0.5kb upstream 500 false Chr08: 19375604-19376103 Phaseolus vulgaris
Phvul.008G125000 0.5kb downstream 0.5kb downstream 6935 true Chr08: 19376104-19383038 Phaseolus vulgaris
Phvul.008G125000 0.5kb downstream 0.5kb downstream 500 false Chr08: 19382539-19383038 Phaseolus vulgaris
Phvul.008G125000 1.0kb upstream 1.0kb upstream 7435 true Chr08: 19375104-19382538 Phaseolus vulgaris
Phvul.008G125000 1.0kb upstream 1.0kb upstream 1000 false Chr08: 19375104-19376103 Phaseolus vulgaris
Phvul.008G125000 1.0kb downstream 1.0kb downstream 7435 true Chr08: 19376104-19383538 Phaseolus vulgaris
Phvul.008G125000 1.0kb downstream 1.0kb downstream 1000 false Chr08: 19382539-19383538 Phaseolus vulgaris
Phvul.008G125000 2.0kb upstream 2.0kb upstream 8435 true Chr08: 19374104-19382538 Phaseolus vulgaris
Phvul.008G125000 2.0kb upstream 2.0kb upstream 2000 false Chr08: 19374104-19376103 Phaseolus vulgaris
Phvul.008G125000 2.0kb downstream 2.0kb downstream 8435 true Chr08: 19376104-19384538 Phaseolus vulgaris
Phvul.008G125000 2.0kb downstream 2.0kb downstream 2000 false Chr08: 19382539-19384538 Phaseolus vulgaris
Phvul.008G125000 5.0kb upstream 5.0kb upstream 11435 true Chr08: 19371104-19382538 Phaseolus vulgaris
Phvul.008G125000 5.0kb upstream 5.0kb upstream 5000 false Chr08: 19371104-19376103 Phaseolus vulgaris
Phvul.008G125000 5.0kb downstream 5.0kb downstream 11435 true Chr08: 19376104-19387538 Phaseolus vulgaris
Phvul.008G125000 5.0kb downstream 5.0kb downstream 5000 false Chr08: 19382539-19387538 Phaseolus vulgaris
Phvul.008G125000 10.0kb upstream 10.0kb upstream 16435 true Chr08: 19366104-19382538 Phaseolus vulgaris
Phvul.008G125000 10.0kb upstream 10.0kb upstream 10000 false Chr08: 19366104-19376103 Phaseolus vulgaris
Phvul.008G125000 10.0kb downstream 10.0kb downstream 16435 true Chr08: 19376104-19392538 Phaseolus vulgaris
Phvul.008G125000 10.0kb downstream 10.0kb downstream 10000 false Chr08: 19382539-19392538 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122304683 5265 Fabidae View MSA
124063246 5270 Rosid View MSA
123741840 5271 Pentapetalae View MSA
122794396 5272 Eudicot View MSA
122048995 5273 Angiosperm View MSA
121348394 5274 Embryophyte View MSA
123425252 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 7.67617 0.0 28.7235   High
cufflinks 2.56842 0.0 12.8868   Low
cufflinks 3.85359 0.0 16.9008    
cufflinks 5.0451 0.0 21.3314    
cufflinks 3.43359 0.0 13.4147    
cufflinks 3.012 0.0 11.8977    
cufflinks 3.43195 0.0 13.2418    
cufflinks 3.24054 0.0 15.2047    
cufflinks 3.86633 0.0 17.5482    
cufflinks 4.67465 0.0 19.7436    
cufflinks 3.28723 0.0 15.5173    

0 Strain