Gene : Phvul.008G124900 P. vulgaris v2.1
Defline:  (1 of 5) PF00069//PF00954//PF01453//PF08276 - Protein kinase domain (Pkinase) // S-locus glycoprotein domain (S_locus_glycop) // D-mannose binding lectin (B_lectin) // PAN-like domain (PAN_2) Genomic Order:  1287
Name:  ? Phvul.008G124900 Secondary Identifier:  ? PAC:37157937
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.008G124900 0.5kb upstream 0.5kb upstream 2846 true Chr08: 19421181-19424026 Phaseolus vulgaris
Phvul.008G124900 0.5kb upstream 0.5kb upstream 500 false Chr08: 19423527-19424026 Phaseolus vulgaris
Phvul.008G124900 0.5kb downstream 0.5kb downstream 2846 true Chr08: 19420681-19423526 Phaseolus vulgaris
Phvul.008G124900 0.5kb downstream 0.5kb downstream 500 false Chr08: 19420681-19421180 Phaseolus vulgaris
Phvul.008G124900 1.0kb upstream 1.0kb upstream 3346 true Chr08: 19421181-19424526 Phaseolus vulgaris
Phvul.008G124900 1.0kb upstream 1.0kb upstream 1000 false Chr08: 19423527-19424526 Phaseolus vulgaris
Phvul.008G124900 1.0kb downstream 1.0kb downstream 3346 true Chr08: 19420181-19423526 Phaseolus vulgaris
Phvul.008G124900 1.0kb downstream 1.0kb downstream 1000 false Chr08: 19420181-19421180 Phaseolus vulgaris
Phvul.008G124900 2.0kb upstream 2.0kb upstream 4346 true Chr08: 19421181-19425526 Phaseolus vulgaris
Phvul.008G124900 2.0kb upstream 2.0kb upstream 2000 false Chr08: 19423527-19425526 Phaseolus vulgaris
Phvul.008G124900 2.0kb downstream 2.0kb downstream 4346 true Chr08: 19419181-19423526 Phaseolus vulgaris
Phvul.008G124900 2.0kb downstream 2.0kb downstream 2000 false Chr08: 19419181-19421180 Phaseolus vulgaris
Phvul.008G124900 5.0kb upstream 5.0kb upstream 7346 true Chr08: 19421181-19428526 Phaseolus vulgaris
Phvul.008G124900 5.0kb upstream 5.0kb upstream 5000 false Chr08: 19423527-19428526 Phaseolus vulgaris
Phvul.008G124900 5.0kb downstream 5.0kb downstream 7346 true Chr08: 19416181-19423526 Phaseolus vulgaris
Phvul.008G124900 5.0kb downstream 5.0kb downstream 5000 false Chr08: 19416181-19421180 Phaseolus vulgaris
Phvul.008G124900 10.0kb upstream 10.0kb upstream 12346 true Chr08: 19421181-19433526 Phaseolus vulgaris
Phvul.008G124900 10.0kb upstream 10.0kb upstream 10000 false Chr08: 19423527-19433526 Phaseolus vulgaris
Phvul.008G124900 10.0kb downstream 10.0kb downstream 12346 true Chr08: 19411181-19423526 Phaseolus vulgaris
Phvul.008G124900 10.0kb downstream 10.0kb downstream 10000 false Chr08: 19411181-19421180 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122048151 5273 Angiosperm View MSA
122314449 5265 Fabidae View MSA
124071977 5270 Rosid View MSA
123751371 5271 Pentapetalae View MSA
122773994 5272 Eudicot View MSA
121310866 5274 Embryophyte View MSA
123348250 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 4.83121 0.0 13.5803   High
cufflinks 0.208146 0.0 0.807363 Low  
cufflinks 1.22252 0.0 3.98811    
cufflinks 1.11393 0.0 3.72007    
cufflinks 1.51637 0.0 4.88942    
cufflinks 0.391104 0.0 1.44087 Low  
cufflinks 0.248881 0.0 0.95279 Low  
cufflinks 0.0831987 0.0 0.346161 Low  
cufflinks 0.575315 0.0 2.05409    
cufflinks 0.00917653 0.0 0.048215 Low Low
cufflinks 0.777483 0.0 2.69803    

0 Strain