Gene : Phvul.008G125500 P. vulgaris v2.1
Defline:  (1 of 1) PTHR15898:SF1 - GLUCOSE-INDUCED DEGRADATION PROTEIN 4 HOMOLOG Genomic Order:  1281
Name:  ? Phvul.008G125500 Secondary Identifier:  ? PAC:37157658
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.008G125500 0.5kb upstream 0.5kb upstream 9013 true Chr08: 19315175-19324187 Phaseolus vulgaris
Phvul.008G125500 0.5kb upstream 0.5kb upstream 500 false Chr08: 19323688-19324187 Phaseolus vulgaris
Phvul.008G125500 0.5kb downstream 0.5kb downstream 9013 true Chr08: 19314675-19323687 Phaseolus vulgaris
Phvul.008G125500 0.5kb downstream 0.5kb downstream 500 false Chr08: 19314675-19315174 Phaseolus vulgaris
Phvul.008G125500 1.0kb upstream 1.0kb upstream 9513 true Chr08: 19315175-19324687 Phaseolus vulgaris
Phvul.008G125500 1.0kb upstream 1.0kb upstream 1000 false Chr08: 19323688-19324687 Phaseolus vulgaris
Phvul.008G125500 1.0kb downstream 1.0kb downstream 9513 true Chr08: 19314175-19323687 Phaseolus vulgaris
Phvul.008G125500 1.0kb downstream 1.0kb downstream 1000 false Chr08: 19314175-19315174 Phaseolus vulgaris
Phvul.008G125500 2.0kb upstream 2.0kb upstream 10513 true Chr08: 19315175-19325687 Phaseolus vulgaris
Phvul.008G125500 2.0kb upstream 2.0kb upstream 2000 false Chr08: 19323688-19325687 Phaseolus vulgaris
Phvul.008G125500 2.0kb downstream 2.0kb downstream 10513 true Chr08: 19313175-19323687 Phaseolus vulgaris
Phvul.008G125500 2.0kb downstream 2.0kb downstream 2000 false Chr08: 19313175-19315174 Phaseolus vulgaris
Phvul.008G125500 5.0kb upstream 5.0kb upstream 13513 true Chr08: 19315175-19328687 Phaseolus vulgaris
Phvul.008G125500 5.0kb upstream 5.0kb upstream 5000 false Chr08: 19323688-19328687 Phaseolus vulgaris
Phvul.008G125500 5.0kb downstream 5.0kb downstream 13513 true Chr08: 19310175-19323687 Phaseolus vulgaris
Phvul.008G125500 5.0kb downstream 5.0kb downstream 5000 false Chr08: 19310175-19315174 Phaseolus vulgaris
Phvul.008G125500 10.0kb upstream 10.0kb upstream 18513 true Chr08: 19315175-19333687 Phaseolus vulgaris
Phvul.008G125500 10.0kb upstream 10.0kb upstream 10000 false Chr08: 19323688-19333687 Phaseolus vulgaris
Phvul.008G125500 10.0kb downstream 10.0kb downstream 18513 true Chr08: 19305175-19323687 Phaseolus vulgaris
Phvul.008G125500 10.0kb downstream 10.0kb downstream 10000 false Chr08: 19305175-19315174 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122299915 5265 Fabidae View MSA
124060763 5270 Rosid View MSA
123743131 5271 Pentapetalae View MSA
122792219 5272 Eudicot View MSA
122046771 5273 Angiosperm View MSA
121351616 5274 Embryophyte View MSA
123427773 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 14.6725 0.0 39.7033   High
cufflinks 11.703 0.0 32.4295    
cufflinks 13.6012 0.0 37.0481   High
cufflinks 11.0791 0.0 30.9493    
cufflinks 9.87076 0.0 27.9177    
cufflinks 11.1405 0.0 30.9804    
cufflinks 8.18455 0.0 23.4356   Low
cufflinks 10.0806 0.0 28.2242    
cufflinks 10.5009 0.0 29.3981    
cufflinks 12.8903 0.0 35.4397    
cufflinks 9.98432 0.0 28.2036    

0 Strain