Gene : Phvul.008G103300 P. vulgaris v2.1
Defline:  (1 of 2) PTHR24078:SF298 - HEAT SHOCK PROTEIN 40-LIKE Genomic Order:  1008
Name:  ? Phvul.008G103300 Secondary Identifier:  ? PAC:37158379
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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.008G103300 0.5kb upstream 0.5kb upstream 2927 true Chr08: 10761711-10764637 Phaseolus vulgaris
Phvul.008G103300 0.5kb upstream 0.5kb upstream 500 false Chr08: 10761711-10762210 Phaseolus vulgaris
Phvul.008G103300 0.5kb downstream 0.5kb downstream 2927 true Chr08: 10762211-10765137 Phaseolus vulgaris
Phvul.008G103300 0.5kb downstream 0.5kb downstream 500 false Chr08: 10764638-10765137 Phaseolus vulgaris
Phvul.008G103300 1.0kb upstream 1.0kb upstream 3427 true Chr08: 10761211-10764637 Phaseolus vulgaris
Phvul.008G103300 1.0kb upstream 1.0kb upstream 1000 false Chr08: 10761211-10762210 Phaseolus vulgaris
Phvul.008G103300 1.0kb downstream 1.0kb downstream 3427 true Chr08: 10762211-10765637 Phaseolus vulgaris
Phvul.008G103300 1.0kb downstream 1.0kb downstream 1000 false Chr08: 10764638-10765637 Phaseolus vulgaris
Phvul.008G103300 2.0kb upstream 2.0kb upstream 4427 true Chr08: 10760211-10764637 Phaseolus vulgaris
Phvul.008G103300 2.0kb upstream 2.0kb upstream 2000 false Chr08: 10760211-10762210 Phaseolus vulgaris
Phvul.008G103300 2.0kb downstream 2.0kb downstream 4427 true Chr08: 10762211-10766637 Phaseolus vulgaris
Phvul.008G103300 2.0kb downstream 2.0kb downstream 2000 false Chr08: 10764638-10766637 Phaseolus vulgaris
Phvul.008G103300 5.0kb upstream 5.0kb upstream 7427 true Chr08: 10757211-10764637 Phaseolus vulgaris
Phvul.008G103300 5.0kb upstream 5.0kb upstream 5000 false Chr08: 10757211-10762210 Phaseolus vulgaris
Phvul.008G103300 5.0kb downstream 5.0kb downstream 7427 true Chr08: 10762211-10769637 Phaseolus vulgaris
Phvul.008G103300 5.0kb downstream 5.0kb downstream 5000 false Chr08: 10764638-10769637 Phaseolus vulgaris
Phvul.008G103300 10.0kb upstream 10.0kb upstream 12427 true Chr08: 10752211-10764637 Phaseolus vulgaris
Phvul.008G103300 10.0kb upstream 10.0kb upstream 10000 false Chr08: 10752211-10762210 Phaseolus vulgaris
Phvul.008G103300 10.0kb downstream 10.0kb downstream 12427 true Chr08: 10762211-10774637 Phaseolus vulgaris
Phvul.008G103300 10.0kb downstream 10.0kb downstream 10000 false Chr08: 10764638-10774637 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122309230 5265 Fabidae View MSA
124067139 5270 Rosid View MSA
123747669 5271 Pentapetalae View MSA
122796849 5272 Eudicot View MSA
122043533 5273 Angiosperm View MSA
123429128 5275 Viridiplantae View MSA
121350390 5274 Embryophyte View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 11.2108 0.0 30.0262   High
cufflinks 8.69484 0.0 23.8404    
cufflinks 8.53116 0.0 23.4621    
cufflinks 7.38055 0.0 20.6467   Low
cufflinks 9.60974 0.0 26.2241    
cufflinks 8.86958 0.0 24.2652    
cufflinks 10.5048 0.0 28.1813   High
cufflinks 8.42699 0.0 22.9982    
cufflinks 10.2915 0.0 27.7364    
cufflinks 9.22026 0.0 25.191    
cufflinks 10.1057 0.0 27.3846    

0 Strain