Gene : Phvul.008G102300 P. vulgaris v2.1
Defline:  (1 of 3) PTHR10641:SF457 - TRANSCRIPTION FACTOR AS1 Genomic Order:  1183
Name:  ? Phvul.008G102300 Secondary Identifier:  ? PAC:37159451
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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.008G102300 0.5kb upstream 0.5kb upstream 3632 true Chr08: 15311416-15315047 Phaseolus vulgaris
Phvul.008G102300 0.5kb upstream 0.5kb upstream 500 false Chr08: 15311416-15311915 Phaseolus vulgaris
Phvul.008G102300 0.5kb downstream 0.5kb downstream 3632 true Chr08: 15311916-15315547 Phaseolus vulgaris
Phvul.008G102300 0.5kb downstream 0.5kb downstream 500 false Chr08: 15315048-15315547 Phaseolus vulgaris
Phvul.008G102300 1.0kb upstream 1.0kb upstream 4132 true Chr08: 15310916-15315047 Phaseolus vulgaris
Phvul.008G102300 1.0kb upstream 1.0kb upstream 1000 false Chr08: 15310916-15311915 Phaseolus vulgaris
Phvul.008G102300 1.0kb downstream 1.0kb downstream 4132 true Chr08: 15311916-15316047 Phaseolus vulgaris
Phvul.008G102300 1.0kb downstream 1.0kb downstream 1000 false Chr08: 15315048-15316047 Phaseolus vulgaris
Phvul.008G102300 2.0kb upstream 2.0kb upstream 5132 true Chr08: 15309916-15315047 Phaseolus vulgaris
Phvul.008G102300 2.0kb upstream 2.0kb upstream 2000 false Chr08: 15309916-15311915 Phaseolus vulgaris
Phvul.008G102300 2.0kb downstream 2.0kb downstream 5132 true Chr08: 15311916-15317047 Phaseolus vulgaris
Phvul.008G102300 2.0kb downstream 2.0kb downstream 2000 false Chr08: 15315048-15317047 Phaseolus vulgaris
Phvul.008G102300 5.0kb upstream 5.0kb upstream 8132 true Chr08: 15306916-15315047 Phaseolus vulgaris
Phvul.008G102300 5.0kb upstream 5.0kb upstream 5000 false Chr08: 15306916-15311915 Phaseolus vulgaris
Phvul.008G102300 5.0kb downstream 5.0kb downstream 8132 true Chr08: 15311916-15320047 Phaseolus vulgaris
Phvul.008G102300 5.0kb downstream 5.0kb downstream 5000 false Chr08: 15315048-15320047 Phaseolus vulgaris
Phvul.008G102300 10.0kb upstream 10.0kb upstream 13132 true Chr08: 15301916-15315047 Phaseolus vulgaris
Phvul.008G102300 10.0kb upstream 10.0kb upstream 10000 false Chr08: 15301916-15311915 Phaseolus vulgaris
Phvul.008G102300 10.0kb downstream 10.0kb downstream 13132 true Chr08: 15311916-15325047 Phaseolus vulgaris
Phvul.008G102300 10.0kb downstream 10.0kb downstream 10000 false Chr08: 15315048-15325047 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122299179 5265 Fabidae View MSA
124071895 5270 Rosid View MSA
123753219 5271 Pentapetalae View MSA
122787054 5272 Eudicot View MSA
122045280 5273 Angiosperm View MSA
121310428 5274 Embryophyte View MSA
123347915 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 12.6413 0.0 33.2458    
cufflinks 22.9369 0.0 59.2878    
cufflinks 14.0248 0.0 36.6185    
cufflinks 28.6574 0.0 74.2003    
cufflinks 13.0667 0.0 34.3495    
cufflinks 39.1512 0.0 102.65 High High
cufflinks 3.00995 0.0 8.94184   Low
cufflinks 3.62173 0.0 10.5767   Low
cufflinks 1.71856 0.0 5.44253   Low
cufflinks 13.7058 0.0 35.8888    
cufflinks 21.9521 0.0 56.7473    

0 Strain