Gene : Phvul.008G105700 P. vulgaris v2.1
Defline:  (1 of 3) K01988 - lactosylceramide 4-alpha-galactosyltransferase (A4GALT) Genomic Order:  1035
Name:  ? Phvul.008G105700 Secondary Identifier:  ? PAC:37158751
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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.008G105700 0.5kb upstream 0.5kb upstream 2011 true Chr08: 11649696-11651706 Phaseolus vulgaris
Phvul.008G105700 0.5kb upstream 0.5kb upstream 500 false Chr08: 11649696-11650195 Phaseolus vulgaris
Phvul.008G105700 0.5kb downstream 0.5kb downstream 2011 true Chr08: 11650196-11652206 Phaseolus vulgaris
Phvul.008G105700 0.5kb downstream 0.5kb downstream 500 false Chr08: 11651707-11652206 Phaseolus vulgaris
Phvul.008G105700 1.0kb upstream 1.0kb upstream 2511 true Chr08: 11649196-11651706 Phaseolus vulgaris
Phvul.008G105700 1.0kb upstream 1.0kb upstream 1000 false Chr08: 11649196-11650195 Phaseolus vulgaris
Phvul.008G105700 1.0kb downstream 1.0kb downstream 2511 true Chr08: 11650196-11652706 Phaseolus vulgaris
Phvul.008G105700 1.0kb downstream 1.0kb downstream 1000 false Chr08: 11651707-11652706 Phaseolus vulgaris
Phvul.008G105700 2.0kb upstream 2.0kb upstream 3511 true Chr08: 11648196-11651706 Phaseolus vulgaris
Phvul.008G105700 2.0kb upstream 2.0kb upstream 2000 false Chr08: 11648196-11650195 Phaseolus vulgaris
Phvul.008G105700 2.0kb downstream 2.0kb downstream 3511 true Chr08: 11650196-11653706 Phaseolus vulgaris
Phvul.008G105700 2.0kb downstream 2.0kb downstream 2000 false Chr08: 11651707-11653706 Phaseolus vulgaris
Phvul.008G105700 5.0kb upstream 5.0kb upstream 6511 true Chr08: 11645196-11651706 Phaseolus vulgaris
Phvul.008G105700 5.0kb upstream 5.0kb upstream 5000 false Chr08: 11645196-11650195 Phaseolus vulgaris
Phvul.008G105700 5.0kb downstream 5.0kb downstream 6511 true Chr08: 11650196-11656706 Phaseolus vulgaris
Phvul.008G105700 5.0kb downstream 5.0kb downstream 5000 false Chr08: 11651707-11656706 Phaseolus vulgaris
Phvul.008G105700 10.0kb upstream 10.0kb upstream 11511 true Chr08: 11640196-11651706 Phaseolus vulgaris
Phvul.008G105700 10.0kb upstream 10.0kb upstream 10000 false Chr08: 11640196-11650195 Phaseolus vulgaris
Phvul.008G105700 10.0kb downstream 10.0kb downstream 11511 true Chr08: 11650196-11661706 Phaseolus vulgaris
Phvul.008G105700 10.0kb downstream 10.0kb downstream 10000 false Chr08: 11651707-11661706 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122300789 5265 Fabidae View MSA
124061006 5270 Rosid View MSA
123741255 5271 Pentapetalae View MSA
122792990 5272 Eudicot View MSA
122047260 5273 Angiosperm View MSA
121347765 5274 Embryophyte View MSA
123425560 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.399596 0.0 1.51948 Low  
cufflinks 0.127365 0.0 0.531436 Low  
cufflinks 0.0379249 0.0 0.177136 Low Low
cufflinks 0.267525 0.0 1.05742 Low  
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0869727 0.0 0.37528 Low  
cufflinks 0.654345 0.0 2.39095    
cufflinks 0.435477 0.0 1.64291 Low  
cufflinks 0.112614 0.0 0.476191 Low  
cufflinks 2.00962 0.0 6.53179   High
cufflinks 0.117452 0.0 0.49529 Low  

0 Strain