Gene : Phvul.008G111400 P. vulgaris v2.1
Defline:  (1 of 1) PTHR15852:SF20 - CHAPERONE PROTEIN DNAJ-LIKE PROTEIN Genomic Order:  1091
Name:  ? Phvul.008G111400 Secondary Identifier:  ? PAC:37158305
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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.008G111400 0.5kb upstream 0.5kb upstream 5234 true Chr08: 12646636-12651869 Phaseolus vulgaris
Phvul.008G111400 0.5kb upstream 0.5kb upstream 500 false Chr08: 12646636-12647135 Phaseolus vulgaris
Phvul.008G111400 0.5kb downstream 0.5kb downstream 5234 true Chr08: 12647136-12652369 Phaseolus vulgaris
Phvul.008G111400 0.5kb downstream 0.5kb downstream 500 false Chr08: 12651870-12652369 Phaseolus vulgaris
Phvul.008G111400 1.0kb upstream 1.0kb upstream 5734 true Chr08: 12646136-12651869 Phaseolus vulgaris
Phvul.008G111400 1.0kb upstream 1.0kb upstream 1000 false Chr08: 12646136-12647135 Phaseolus vulgaris
Phvul.008G111400 1.0kb downstream 1.0kb downstream 5734 true Chr08: 12647136-12652869 Phaseolus vulgaris
Phvul.008G111400 1.0kb downstream 1.0kb downstream 1000 false Chr08: 12651870-12652869 Phaseolus vulgaris
Phvul.008G111400 2.0kb upstream 2.0kb upstream 6734 true Chr08: 12645136-12651869 Phaseolus vulgaris
Phvul.008G111400 2.0kb upstream 2.0kb upstream 2000 false Chr08: 12645136-12647135 Phaseolus vulgaris
Phvul.008G111400 2.0kb downstream 2.0kb downstream 6734 true Chr08: 12647136-12653869 Phaseolus vulgaris
Phvul.008G111400 2.0kb downstream 2.0kb downstream 2000 false Chr08: 12651870-12653869 Phaseolus vulgaris
Phvul.008G111400 5.0kb upstream 5.0kb upstream 9734 true Chr08: 12642136-12651869 Phaseolus vulgaris
Phvul.008G111400 5.0kb upstream 5.0kb upstream 5000 false Chr08: 12642136-12647135 Phaseolus vulgaris
Phvul.008G111400 5.0kb downstream 5.0kb downstream 9734 true Chr08: 12647136-12656869 Phaseolus vulgaris
Phvul.008G111400 5.0kb downstream 5.0kb downstream 5000 false Chr08: 12651870-12656869 Phaseolus vulgaris
Phvul.008G111400 10.0kb upstream 10.0kb upstream 14734 true Chr08: 12637136-12651869 Phaseolus vulgaris
Phvul.008G111400 10.0kb upstream 10.0kb upstream 10000 false Chr08: 12637136-12647135 Phaseolus vulgaris
Phvul.008G111400 10.0kb downstream 10.0kb downstream 14734 true Chr08: 12647136-12661869 Phaseolus vulgaris
Phvul.008G111400 10.0kb downstream 10.0kb downstream 10000 false Chr08: 12651870-12661869 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122300523 5265 Fabidae View MSA
124067925 5270 Rosid View MSA
123738521 5271 Pentapetalae View MSA
122790446 5272 Eudicot View MSA
122044241 5273 Angiosperm View MSA
121346623 5274 Embryophyte View MSA
123380417 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 14.6509 0.0 38.4067    
cufflinks 9.67179 0.0 26.0457   Low
cufflinks 9.36192 0.0 25.2547   Low
cufflinks 14.6011 0.0 38.4207    
cufflinks 12.1148 0.0 32.2654    
cufflinks 8.36519 0.0 22.7902   Low
cufflinks 12.8299 0.0 33.8499    
cufflinks 11.0143 0.0 29.2979    
cufflinks 15.0371 0.0 39.3285    
cufflinks 16.7083 0.0 43.5649   High
cufflinks 12.9552 0.0 34.2602    

0 Strain