Gene : Phvul.008G108700 P. vulgaris v2.1
Defline:  (1 of 1) K01962 - acetyl-CoA carboxylase carboxyl transferase subunit alpha (accA) Genomic Order:  1064
Name:  ? Phvul.008G108700 Secondary Identifier:  ? PAC:37157791
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Sequence Feature Displayer

Ontology Annotation Displayer

4 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Pvulgaris PWY0-1264 Phaseolus vulgaris pathologic  
Pvulgaris PWY-4381 Phaseolus vulgaris pathologic  
Pvulgaris PWY-5156 Phaseolus vulgaris pathologic  
Pvulgaris PWY-7388 Phaseolus vulgaris pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.008G108700 0.5kb upstream 0.5kb upstream 6709 true Chr08: 12208858-12215566 Phaseolus vulgaris
Phvul.008G108700 0.5kb upstream 0.5kb upstream 500 false Chr08: 12215067-12215566 Phaseolus vulgaris
Phvul.008G108700 0.5kb downstream 0.5kb downstream 6709 true Chr08: 12208358-12215066 Phaseolus vulgaris
Phvul.008G108700 0.5kb downstream 0.5kb downstream 500 false Chr08: 12208358-12208857 Phaseolus vulgaris
Phvul.008G108700 1.0kb upstream 1.0kb upstream 7209 true Chr08: 12208858-12216066 Phaseolus vulgaris
Phvul.008G108700 1.0kb upstream 1.0kb upstream 1000 false Chr08: 12215067-12216066 Phaseolus vulgaris
Phvul.008G108700 1.0kb downstream 1.0kb downstream 7209 true Chr08: 12207858-12215066 Phaseolus vulgaris
Phvul.008G108700 1.0kb downstream 1.0kb downstream 1000 false Chr08: 12207858-12208857 Phaseolus vulgaris
Phvul.008G108700 2.0kb upstream 2.0kb upstream 8209 true Chr08: 12208858-12217066 Phaseolus vulgaris
Phvul.008G108700 2.0kb upstream 2.0kb upstream 2000 false Chr08: 12215067-12217066 Phaseolus vulgaris
Phvul.008G108700 2.0kb downstream 2.0kb downstream 8209 true Chr08: 12206858-12215066 Phaseolus vulgaris
Phvul.008G108700 2.0kb downstream 2.0kb downstream 2000 false Chr08: 12206858-12208857 Phaseolus vulgaris
Phvul.008G108700 5.0kb upstream 5.0kb upstream 11209 true Chr08: 12208858-12220066 Phaseolus vulgaris
Phvul.008G108700 5.0kb upstream 5.0kb upstream 5000 false Chr08: 12215067-12220066 Phaseolus vulgaris
Phvul.008G108700 5.0kb downstream 5.0kb downstream 11209 true Chr08: 12203858-12215066 Phaseolus vulgaris
Phvul.008G108700 5.0kb downstream 5.0kb downstream 5000 false Chr08: 12203858-12208857 Phaseolus vulgaris
Phvul.008G108700 10.0kb upstream 10.0kb upstream 16209 true Chr08: 12208858-12225066 Phaseolus vulgaris
Phvul.008G108700 10.0kb upstream 10.0kb upstream 10000 false Chr08: 12215067-12225066 Phaseolus vulgaris
Phvul.008G108700 10.0kb downstream 10.0kb downstream 16209 true Chr08: 12198858-12215066 Phaseolus vulgaris
Phvul.008G108700 10.0kb downstream 10.0kb downstream 10000 false Chr08: 12198858-12208857 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122307557 5265 Fabidae View MSA
124065453 5270 Rosid View MSA
123737036 5271 Pentapetalae View MSA
122792152 5272 Eudicot View MSA
122047100 5273 Angiosperm View MSA
121351185 5274 Embryophyte View MSA
123426636 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 15.9668 0.0 41.272   Low
cufflinks 28.3119 0.0 74.3354    
cufflinks 76.2691 0.0 220.168 High High
cufflinks 25.709 0.0 66.9388    
cufflinks 23.1016 0.0 59.9302    
cufflinks 58.9182 0.0 164.589 High High
cufflinks 26.105 0.0 68.2216    
cufflinks 28.7377 0.0 75.6841 High  
cufflinks 32.8692 0.0 86.9526 High  
cufflinks 23.5909 0.0 61.3986    
cufflinks 23.1197 0.0 60.0383    

0 Strain