Gene : Phvul.008G091400 P. vulgaris v2.1
Defline:  (1 of 2) PTHR23324:SF57 - PATELLIN-6 Genomic Order:  926
Name:  ? Phvul.008G091400 Secondary Identifier:  ? PAC:37158517
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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Cufflinks Score Displayer

 

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.008G091400 0.5kb upstream 0.5kb upstream 3703 true Chr08: 9189860-9193562 Phaseolus vulgaris
Phvul.008G091400 0.5kb upstream 0.5kb upstream 500 false Chr08: 9193063-9193562 Phaseolus vulgaris
Phvul.008G091400 0.5kb downstream 0.5kb downstream 3703 true Chr08: 9189360-9193062 Phaseolus vulgaris
Phvul.008G091400 0.5kb downstream 0.5kb downstream 500 false Chr08: 9189360-9189859 Phaseolus vulgaris
Phvul.008G091400 1.0kb upstream 1.0kb upstream 4203 true Chr08: 9189860-9194062 Phaseolus vulgaris
Phvul.008G091400 1.0kb upstream 1.0kb upstream 1000 false Chr08: 9193063-9194062 Phaseolus vulgaris
Phvul.008G091400 1.0kb downstream 1.0kb downstream 4203 true Chr08: 9188860-9193062 Phaseolus vulgaris
Phvul.008G091400 1.0kb downstream 1.0kb downstream 1000 false Chr08: 9188860-9189859 Phaseolus vulgaris
Phvul.008G091400 2.0kb upstream 2.0kb upstream 5203 true Chr08: 9189860-9195062 Phaseolus vulgaris
Phvul.008G091400 2.0kb upstream 2.0kb upstream 2000 false Chr08: 9193063-9195062 Phaseolus vulgaris
Phvul.008G091400 2.0kb downstream 2.0kb downstream 5203 true Chr08: 9187860-9193062 Phaseolus vulgaris
Phvul.008G091400 2.0kb downstream 2.0kb downstream 2000 false Chr08: 9187860-9189859 Phaseolus vulgaris
Phvul.008G091400 5.0kb upstream 5.0kb upstream 8203 true Chr08: 9189860-9198062 Phaseolus vulgaris
Phvul.008G091400 5.0kb upstream 5.0kb upstream 5000 false Chr08: 9193063-9198062 Phaseolus vulgaris
Phvul.008G091400 5.0kb downstream 5.0kb downstream 8203 true Chr08: 9184860-9193062 Phaseolus vulgaris
Phvul.008G091400 5.0kb downstream 5.0kb downstream 5000 false Chr08: 9184860-9189859 Phaseolus vulgaris
Phvul.008G091400 10.0kb upstream 10.0kb upstream 13203 true Chr08: 9189860-9203062 Phaseolus vulgaris
Phvul.008G091400 10.0kb upstream 10.0kb upstream 10000 false Chr08: 9193063-9203062 Phaseolus vulgaris
Phvul.008G091400 10.0kb downstream 10.0kb downstream 13203 true Chr08: 9179860-9193062 Phaseolus vulgaris
Phvul.008G091400 10.0kb downstream 10.0kb downstream 10000 false Chr08: 9179860-9189859 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122297751 5265 Fabidae View MSA
124036137 5270 Rosid View MSA
123743132 5271 Pentapetalae View MSA
122791102 5272 Eudicot View MSA
122041673 5273 Angiosperm View MSA
123429024 5275 Viridiplantae View MSA
121350368 5274 Embryophyte View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 4.47669 0.0 12.6161    
cufflinks 7.51146 0.0 20.2627    
cufflinks 9.07891 0.0 24.1066    
cufflinks 1.88932 0.0 5.88492    
cufflinks 6.36751 0.0 17.4264    
cufflinks 10.566 0.0 27.7931    
cufflinks 0.137876 0.0 0.548858 Low Low
cufflinks 0.0809386 0.0 0.336758 Low Low
cufflinks 0.202178 0.0 0.782418 Low Low
cufflinks 0.329456 0.0 1.23108    
cufflinks 10.1169 0.0 26.715    

0 Strain