Gene : Phvul.008G091600 P. vulgaris v2.1
Defline:  (1 of 6) PTHR21495:SF77 - DIRIGENT PROTEIN 19 Genomic Order:  928
Name:  ? Phvul.008G091600 Secondary Identifier:  ? PAC:37161478
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0 Pathways

Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.008G091600 0.5kb upstream 0.5kb upstream 1676 true Chr08: 9210333-9212008 Phaseolus vulgaris
Phvul.008G091600 0.5kb upstream 0.5kb upstream 500 false Chr08: 9211509-9212008 Phaseolus vulgaris
Phvul.008G091600 0.5kb downstream 0.5kb downstream 1676 true Chr08: 9209833-9211508 Phaseolus vulgaris
Phvul.008G091600 0.5kb downstream 0.5kb downstream 500 false Chr08: 9209833-9210332 Phaseolus vulgaris
Phvul.008G091600 1.0kb upstream 1.0kb upstream 2176 true Chr08: 9210333-9212508 Phaseolus vulgaris
Phvul.008G091600 1.0kb upstream 1.0kb upstream 1000 false Chr08: 9211509-9212508 Phaseolus vulgaris
Phvul.008G091600 1.0kb downstream 1.0kb downstream 2176 true Chr08: 9209333-9211508 Phaseolus vulgaris
Phvul.008G091600 1.0kb downstream 1.0kb downstream 1000 false Chr08: 9209333-9210332 Phaseolus vulgaris
Phvul.008G091600 2.0kb upstream 2.0kb upstream 3176 true Chr08: 9210333-9213508 Phaseolus vulgaris
Phvul.008G091600 2.0kb upstream 2.0kb upstream 2000 false Chr08: 9211509-9213508 Phaseolus vulgaris
Phvul.008G091600 2.0kb downstream 2.0kb downstream 3176 true Chr08: 9208333-9211508 Phaseolus vulgaris
Phvul.008G091600 2.0kb downstream 2.0kb downstream 2000 false Chr08: 9208333-9210332 Phaseolus vulgaris
Phvul.008G091600 5.0kb upstream 5.0kb upstream 6176 true Chr08: 9210333-9216508 Phaseolus vulgaris
Phvul.008G091600 5.0kb upstream 5.0kb upstream 5000 false Chr08: 9211509-9216508 Phaseolus vulgaris
Phvul.008G091600 5.0kb downstream 5.0kb downstream 6176 true Chr08: 9205333-9211508 Phaseolus vulgaris
Phvul.008G091600 5.0kb downstream 5.0kb downstream 5000 false Chr08: 9205333-9210332 Phaseolus vulgaris
Phvul.008G091600 10.0kb upstream 10.0kb upstream 11176 true Chr08: 9210333-9221508 Phaseolus vulgaris
Phvul.008G091600 10.0kb upstream 10.0kb upstream 10000 false Chr08: 9211509-9221508 Phaseolus vulgaris
Phvul.008G091600 10.0kb downstream 10.0kb downstream 11176 true Chr08: 9200333-9211508 Phaseolus vulgaris
Phvul.008G091600 10.0kb downstream 10.0kb downstream 10000 false Chr08: 9200333-9210332 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122314603 5265 Fabidae View MSA
124074832 5270 Rosid View MSA
123751910 5271 Pentapetalae View MSA
122797233 5272 Eudicot View MSA
122051134 5273 Angiosperm View MSA
121351582 5274 Embryophyte View MSA
123382236 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 5.43781 0.0 16.9091    
cufflinks 17.868 0.0 49.1639    
cufflinks 14.3783 0.0 40.375    
cufflinks 6.22877 0.0 19.1325    
cufflinks 31.8628 0.0 83.9018   High
cufflinks 9.77748 0.0 28.5419    
cufflinks 2.56229 0.0 8.67694    
cufflinks 1.06621 0.0 3.94845   Low
cufflinks 2.28672 0.0 7.85304   Low
cufflinks 7.27069 0.0 21.9764    
cufflinks 36.4676 0.0 95.2593 High High

0 Strain