Gene : Phvul.008G092900 P. vulgaris v2.1
Defline:  (1 of 1) PTHR11206:SF101 - MATE EFFLUX FAMILY PROTEIN 2, CHLOROPLASTIC Genomic Order:  940
Name:  ? Phvul.008G092900 Secondary Identifier:  ? PAC:37158027
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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.008G092900 0.5kb upstream 0.5kb upstream 9514 true Chr08: 9389837-9399350 Phaseolus vulgaris
Phvul.008G092900 0.5kb upstream 0.5kb upstream 500 false Chr08: 9398851-9399350 Phaseolus vulgaris
Phvul.008G092900 0.5kb downstream 0.5kb downstream 9514 true Chr08: 9389337-9398850 Phaseolus vulgaris
Phvul.008G092900 0.5kb downstream 0.5kb downstream 500 false Chr08: 9389337-9389836 Phaseolus vulgaris
Phvul.008G092900 1.0kb upstream 1.0kb upstream 10014 true Chr08: 9389837-9399850 Phaseolus vulgaris
Phvul.008G092900 1.0kb upstream 1.0kb upstream 1000 false Chr08: 9398851-9399850 Phaseolus vulgaris
Phvul.008G092900 1.0kb downstream 1.0kb downstream 10014 true Chr08: 9388837-9398850 Phaseolus vulgaris
Phvul.008G092900 1.0kb downstream 1.0kb downstream 1000 false Chr08: 9388837-9389836 Phaseolus vulgaris
Phvul.008G092900 2.0kb upstream 2.0kb upstream 11014 true Chr08: 9389837-9400850 Phaseolus vulgaris
Phvul.008G092900 2.0kb upstream 2.0kb upstream 2000 false Chr08: 9398851-9400850 Phaseolus vulgaris
Phvul.008G092900 2.0kb downstream 2.0kb downstream 11014 true Chr08: 9387837-9398850 Phaseolus vulgaris
Phvul.008G092900 2.0kb downstream 2.0kb downstream 2000 false Chr08: 9387837-9389836 Phaseolus vulgaris
Phvul.008G092900 5.0kb upstream 5.0kb upstream 14014 true Chr08: 9389837-9403850 Phaseolus vulgaris
Phvul.008G092900 5.0kb upstream 5.0kb upstream 5000 false Chr08: 9398851-9403850 Phaseolus vulgaris
Phvul.008G092900 5.0kb downstream 5.0kb downstream 14014 true Chr08: 9384837-9398850 Phaseolus vulgaris
Phvul.008G092900 5.0kb downstream 5.0kb downstream 5000 false Chr08: 9384837-9389836 Phaseolus vulgaris
Phvul.008G092900 10.0kb upstream 10.0kb upstream 19014 true Chr08: 9389837-9408850 Phaseolus vulgaris
Phvul.008G092900 10.0kb upstream 10.0kb upstream 10000 false Chr08: 9398851-9408850 Phaseolus vulgaris
Phvul.008G092900 10.0kb downstream 10.0kb downstream 19014 true Chr08: 9379837-9398850 Phaseolus vulgaris
Phvul.008G092900 10.0kb downstream 10.0kb downstream 10000 false Chr08: 9379837-9389836 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122306060 5265 Fabidae View MSA
124064118 5270 Rosid View MSA
123739528 5271 Pentapetalae View MSA
122786256 5272 Eudicot View MSA
122046968 5273 Angiosperm View MSA
121348626 5274 Embryophyte View MSA
123428603 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 5.2076 0.0 14.7293    
cufflinks 5.57744 0.0 15.713    
cufflinks 54.7517 0.0 146.324 High High
cufflinks 4.93395 0.0 14.1402    
cufflinks 4.77842 0.0 13.7298    
cufflinks 17.3993 0.0 45.1789   High
cufflinks 2.87657 0.0 8.73679    
cufflinks 2.75945 0.0 8.37862    
cufflinks 3.29256 0.0 9.88832    
cufflinks 7.76143 0.0 21.2245    
cufflinks 4.43161 0.0 12.8406    

0 Strain