Gene : Phvul.008G089700 P. vulgaris v2.1
Defline:  (1 of 1) 6.3.2.4 - D-alanine--D-alanine ligase / D-alanylalanine synthetase Genomic Order:  909
Name:  ? Phvul.008G089700 Secondary Identifier:  ? PAC:37159145
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0 Pathways

Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.008G089700 0.5kb upstream 0.5kb upstream 14517 true Chr08: 8998670-9013186 Phaseolus vulgaris
Phvul.008G089700 0.5kb upstream 0.5kb upstream 500 false Chr08: 8998670-8999169 Phaseolus vulgaris
Phvul.008G089700 0.5kb downstream 0.5kb downstream 14517 true Chr08: 8999170-9013686 Phaseolus vulgaris
Phvul.008G089700 0.5kb downstream 0.5kb downstream 500 false Chr08: 9013187-9013686 Phaseolus vulgaris
Phvul.008G089700 1.0kb upstream 1.0kb upstream 15017 true Chr08: 8998170-9013186 Phaseolus vulgaris
Phvul.008G089700 1.0kb upstream 1.0kb upstream 1000 false Chr08: 8998170-8999169 Phaseolus vulgaris
Phvul.008G089700 1.0kb downstream 1.0kb downstream 15017 true Chr08: 8999170-9014186 Phaseolus vulgaris
Phvul.008G089700 1.0kb downstream 1.0kb downstream 1000 false Chr08: 9013187-9014186 Phaseolus vulgaris
Phvul.008G089700 2.0kb upstream 2.0kb upstream 16017 true Chr08: 8997170-9013186 Phaseolus vulgaris
Phvul.008G089700 2.0kb upstream 2.0kb upstream 2000 false Chr08: 8997170-8999169 Phaseolus vulgaris
Phvul.008G089700 2.0kb downstream 2.0kb downstream 16017 true Chr08: 8999170-9015186 Phaseolus vulgaris
Phvul.008G089700 2.0kb downstream 2.0kb downstream 2000 false Chr08: 9013187-9015186 Phaseolus vulgaris
Phvul.008G089700 5.0kb upstream 5.0kb upstream 19017 true Chr08: 8994170-9013186 Phaseolus vulgaris
Phvul.008G089700 5.0kb upstream 5.0kb upstream 5000 false Chr08: 8994170-8999169 Phaseolus vulgaris
Phvul.008G089700 5.0kb downstream 5.0kb downstream 19017 true Chr08: 8999170-9018186 Phaseolus vulgaris
Phvul.008G089700 5.0kb downstream 5.0kb downstream 5000 false Chr08: 9013187-9018186 Phaseolus vulgaris
Phvul.008G089700 10.0kb upstream 10.0kb upstream 24017 true Chr08: 8989170-9013186 Phaseolus vulgaris
Phvul.008G089700 10.0kb upstream 10.0kb upstream 10000 false Chr08: 8989170-8999169 Phaseolus vulgaris
Phvul.008G089700 10.0kb downstream 10.0kb downstream 24017 true Chr08: 8999170-9023186 Phaseolus vulgaris
Phvul.008G089700 10.0kb downstream 10.0kb downstream 10000 false Chr08: 9013187-9023186 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122304418 5265 Fabidae View MSA
124074775 5270 Rosid View MSA
123747604 5271 Pentapetalae View MSA
122787402 5272 Eudicot View MSA
122042671 5273 Angiosperm View MSA
121345291 5274 Embryophyte View MSA
123380188 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 4.10331 0.0 11.3379   Low
cufflinks 4.60484 0.0 12.6094    
cufflinks 18.7283 0.0 48.5826    
cufflinks 3.06397 0.0 8.76877   Low
cufflinks 20.1376 0.0 52.2278    
cufflinks 8.72173 0.0 22.8036    
cufflinks 20.8376 0.0 54.1836    
cufflinks 15.4766 0.0 40.0228    
cufflinks 71.2253 0.0 205.104 High High
cufflinks 23.8534 0.0 62.3385    
cufflinks 3.92315 0.0 10.9392   Low

0 Strain