Gene : Phvul.008G090400 P. vulgaris v2.1
Defline:  (1 of 3) PTHR11615//PTHR11615:SF144 - NITRATE, FROMATE, IRON DEHYDROGENASE // SUBFAMILY NOT NAMED Genomic Order:  916
Name:  ? Phvul.008G090400 Secondary Identifier:  ? PAC:37157828
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Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.008G090400 0.5kb upstream 0.5kb upstream 3073 true Chr08: 9082003-9085075 Phaseolus vulgaris
Phvul.008G090400 0.5kb upstream 0.5kb upstream 500 false Chr08: 9084576-9085075 Phaseolus vulgaris
Phvul.008G090400 0.5kb downstream 0.5kb downstream 3073 true Chr08: 9081503-9084575 Phaseolus vulgaris
Phvul.008G090400 0.5kb downstream 0.5kb downstream 500 false Chr08: 9081503-9082002 Phaseolus vulgaris
Phvul.008G090400 1.0kb upstream 1.0kb upstream 3573 true Chr08: 9082003-9085575 Phaseolus vulgaris
Phvul.008G090400 1.0kb upstream 1.0kb upstream 1000 false Chr08: 9084576-9085575 Phaseolus vulgaris
Phvul.008G090400 1.0kb downstream 1.0kb downstream 3573 true Chr08: 9081003-9084575 Phaseolus vulgaris
Phvul.008G090400 1.0kb downstream 1.0kb downstream 1000 false Chr08: 9081003-9082002 Phaseolus vulgaris
Phvul.008G090400 2.0kb upstream 2.0kb upstream 4573 true Chr08: 9082003-9086575 Phaseolus vulgaris
Phvul.008G090400 2.0kb upstream 2.0kb upstream 2000 false Chr08: 9084576-9086575 Phaseolus vulgaris
Phvul.008G090400 2.0kb downstream 2.0kb downstream 4573 true Chr08: 9080003-9084575 Phaseolus vulgaris
Phvul.008G090400 2.0kb downstream 2.0kb downstream 2000 false Chr08: 9080003-9082002 Phaseolus vulgaris
Phvul.008G090400 5.0kb upstream 5.0kb upstream 7573 true Chr08: 9082003-9089575 Phaseolus vulgaris
Phvul.008G090400 5.0kb upstream 5.0kb upstream 5000 false Chr08: 9084576-9089575 Phaseolus vulgaris
Phvul.008G090400 5.0kb downstream 5.0kb downstream 7573 true Chr08: 9077003-9084575 Phaseolus vulgaris
Phvul.008G090400 5.0kb downstream 5.0kb downstream 5000 false Chr08: 9077003-9082002 Phaseolus vulgaris
Phvul.008G090400 10.0kb upstream 10.0kb upstream 12573 true Chr08: 9082003-9094575 Phaseolus vulgaris
Phvul.008G090400 10.0kb upstream 10.0kb upstream 10000 false Chr08: 9084576-9094575 Phaseolus vulgaris
Phvul.008G090400 10.0kb downstream 10.0kb downstream 12573 true Chr08: 9072003-9084575 Phaseolus vulgaris
Phvul.008G090400 10.0kb downstream 10.0kb downstream 10000 false Chr08: 9072003-9082002 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122310508 5265 Fabidae View MSA
124068306 5270 Rosid View MSA
123750880 5271 Pentapetalae View MSA
122792969 5272 Eudicot View MSA
122047644 5273 Angiosperm View MSA
121351377 5274 Embryophyte View MSA
123382143 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 5.36404 0.0 16.2824   High
cufflinks 1.01685 0.0 3.70532   Low
cufflinks 2.6135 0.0 8.62963    
cufflinks 3.1678 0.0 10.2229    
cufflinks 2.23912 0.0 7.56258    
cufflinks 1.36852 0.0 4.85375    
cufflinks 1.51756 0.0 5.30782    
cufflinks 2.07735 0.0 7.01397    
cufflinks 1.99576 0.0 6.78889    
cufflinks 1.49107 0.0 5.23437    
cufflinks 1.92375 0.0 6.58714    

0 Strain