Gene : Phvul.008G095400 P. vulgaris v2.1
Defline:  (1 of 3) 4.1.1.1 - Pyruvate decarboxylase / Pyruvic decarboxylase Genomic Order:  964
Name:  ? Phvul.008G095400 Secondary Identifier:  ? PAC:37160543
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Pvulgaris PWY-5486 Phaseolus vulgaris pathologic  
Pvulgaris PWY-6330 Phaseolus vulgaris pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.008G095400 0.5kb upstream 0.5kb upstream 3758 true Chr08: 9762382-9766139 Phaseolus vulgaris
Phvul.008G095400 0.5kb upstream 0.5kb upstream 500 false Chr08: 9765640-9766139 Phaseolus vulgaris
Phvul.008G095400 0.5kb downstream 0.5kb downstream 3758 true Chr08: 9761882-9765639 Phaseolus vulgaris
Phvul.008G095400 0.5kb downstream 0.5kb downstream 500 false Chr08: 9761882-9762381 Phaseolus vulgaris
Phvul.008G095400 1.0kb upstream 1.0kb upstream 4258 true Chr08: 9762382-9766639 Phaseolus vulgaris
Phvul.008G095400 1.0kb upstream 1.0kb upstream 1000 false Chr08: 9765640-9766639 Phaseolus vulgaris
Phvul.008G095400 1.0kb downstream 1.0kb downstream 4258 true Chr08: 9761382-9765639 Phaseolus vulgaris
Phvul.008G095400 1.0kb downstream 1.0kb downstream 1000 false Chr08: 9761382-9762381 Phaseolus vulgaris
Phvul.008G095400 2.0kb upstream 2.0kb upstream 5258 true Chr08: 9762382-9767639 Phaseolus vulgaris
Phvul.008G095400 2.0kb upstream 2.0kb upstream 2000 false Chr08: 9765640-9767639 Phaseolus vulgaris
Phvul.008G095400 2.0kb downstream 2.0kb downstream 5258 true Chr08: 9760382-9765639 Phaseolus vulgaris
Phvul.008G095400 2.0kb downstream 2.0kb downstream 2000 false Chr08: 9760382-9762381 Phaseolus vulgaris
Phvul.008G095400 5.0kb upstream 5.0kb upstream 8258 true Chr08: 9762382-9770639 Phaseolus vulgaris
Phvul.008G095400 5.0kb upstream 5.0kb upstream 5000 false Chr08: 9765640-9770639 Phaseolus vulgaris
Phvul.008G095400 5.0kb downstream 5.0kb downstream 8258 true Chr08: 9757382-9765639 Phaseolus vulgaris
Phvul.008G095400 5.0kb downstream 5.0kb downstream 5000 false Chr08: 9757382-9762381 Phaseolus vulgaris
Phvul.008G095400 10.0kb upstream 10.0kb upstream 13258 true Chr08: 9762382-9775639 Phaseolus vulgaris
Phvul.008G095400 10.0kb upstream 10.0kb upstream 10000 false Chr08: 9765640-9775639 Phaseolus vulgaris
Phvul.008G095400 10.0kb downstream 10.0kb downstream 13258 true Chr08: 9752382-9765639 Phaseolus vulgaris
Phvul.008G095400 10.0kb downstream 10.0kb downstream 10000 false Chr08: 9752382-9762381 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122310643 5265 Fabidae View MSA
124061112 5270 Rosid View MSA
123745857 5271 Pentapetalae View MSA
122791773 5272 Eudicot View MSA
122042059 5273 Angiosperm View MSA
121351042 5274 Embryophyte View MSA
123426958 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 7.86166 0.0 21.0039   Low
cufflinks 28.8449 0.0 75.2867    
cufflinks 35.3819 0.0 93.2725    
cufflinks 6.58735 0.0 17.7981   Low
cufflinks 28.5626 0.0 74.6079    
cufflinks 27.4569 0.0 71.4964    
cufflinks 60.9228 0.0 168.875 High High
cufflinks 26.2731 0.0 68.3176    
cufflinks 29.6374 0.0 77.5673    
cufflinks 24.5185 0.0 63.6341    
cufflinks 56.6952 0.0 155.716 High High

0 Strain