Gene : Phvul.008G097900 P. vulgaris v2.1
Defline:  (1 of 1) PTHR22952//PTHR22952:SF145 - CAMP-RESPONSE ELEMENT BINDING PROTEIN-RELATED // SUBFAMILY NOT NAMED Genomic Order:  990
Name:  ? Phvul.008G097900 Secondary Identifier:  ? PAC:37160377
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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Cufflinks Score Displayer

 

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.008G097900 0.5kb upstream 0.5kb upstream 1196 true Chr08: 10142175-10143370 Phaseolus vulgaris
Phvul.008G097900 0.5kb upstream 0.5kb upstream 500 false Chr08: 10142175-10142674 Phaseolus vulgaris
Phvul.008G097900 0.5kb downstream 0.5kb downstream 1196 true Chr08: 10142675-10143870 Phaseolus vulgaris
Phvul.008G097900 0.5kb downstream 0.5kb downstream 500 false Chr08: 10143371-10143870 Phaseolus vulgaris
Phvul.008G097900 1.0kb upstream 1.0kb upstream 1696 true Chr08: 10141675-10143370 Phaseolus vulgaris
Phvul.008G097900 1.0kb upstream 1.0kb upstream 1000 false Chr08: 10141675-10142674 Phaseolus vulgaris
Phvul.008G097900 1.0kb downstream 1.0kb downstream 1696 true Chr08: 10142675-10144370 Phaseolus vulgaris
Phvul.008G097900 1.0kb downstream 1.0kb downstream 1000 false Chr08: 10143371-10144370 Phaseolus vulgaris
Phvul.008G097900 2.0kb upstream 2.0kb upstream 2696 true Chr08: 10140675-10143370 Phaseolus vulgaris
Phvul.008G097900 2.0kb upstream 2.0kb upstream 2000 false Chr08: 10140675-10142674 Phaseolus vulgaris
Phvul.008G097900 2.0kb downstream 2.0kb downstream 2696 true Chr08: 10142675-10145370 Phaseolus vulgaris
Phvul.008G097900 2.0kb downstream 2.0kb downstream 2000 false Chr08: 10143371-10145370 Phaseolus vulgaris
Phvul.008G097900 5.0kb upstream 5.0kb upstream 5696 true Chr08: 10137675-10143370 Phaseolus vulgaris
Phvul.008G097900 5.0kb upstream 5.0kb upstream 5000 false Chr08: 10137675-10142674 Phaseolus vulgaris
Phvul.008G097900 5.0kb downstream 5.0kb downstream 5696 true Chr08: 10142675-10148370 Phaseolus vulgaris
Phvul.008G097900 5.0kb downstream 5.0kb downstream 5000 false Chr08: 10143371-10148370 Phaseolus vulgaris
Phvul.008G097900 10.0kb upstream 10.0kb upstream 10696 true Chr08: 10132675-10143370 Phaseolus vulgaris
Phvul.008G097900 10.0kb upstream 10.0kb upstream 10000 false Chr08: 10132675-10142674 Phaseolus vulgaris
Phvul.008G097900 10.0kb downstream 10.0kb downstream 10696 true Chr08: 10142675-10153370 Phaseolus vulgaris
Phvul.008G097900 10.0kb downstream 10.0kb downstream 10000 false Chr08: 10143371-10153370 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122308493 5265 Fabidae View MSA
124067478 5270 Rosid View MSA
123742632 5271 Pentapetalae View MSA
122797176 5272 Eudicot View MSA
122044806 5273 Angiosperm View MSA
121350176 5274 Embryophyte View MSA
123381607 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.62034 0.0 9.05633    
cufflinks 13.2434 0.0 37.9319   High
cufflinks 0.422279 0.0 1.70006 Low  
cufflinks 10.6387 0.0 31.3501   High
cufflinks 1.12968 0.0 4.23502    
cufflinks 1.07443 0.0 4.02155    
cufflinks 0.416503 0.0 1.67336 Low  
cufflinks 0.837377 0.0 3.19328    
cufflinks 0.797705 0.0 3.04984    
cufflinks 1.02632 0.0 3.86604    
cufflinks 0.534654 0.0 2.11447 Low  

0 Strain