Gene : Phvul.008G096600 P. vulgaris v2.1
Defline:  (1 of 1) K07152 - protein SCO1/2 (SCO1_2) Genomic Order:  975
Name:  ? Phvul.008G096600 Secondary Identifier:  ? PAC:37160386
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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.008G096600 0.5kb upstream 0.5kb upstream 3840 true Chr08: 9931163-9935002 Phaseolus vulgaris
Phvul.008G096600 0.5kb upstream 0.5kb upstream 500 false Chr08: 9934503-9935002 Phaseolus vulgaris
Phvul.008G096600 0.5kb downstream 0.5kb downstream 3840 true Chr08: 9930663-9934502 Phaseolus vulgaris
Phvul.008G096600 0.5kb downstream 0.5kb downstream 500 false Chr08: 9930663-9931162 Phaseolus vulgaris
Phvul.008G096600 1.0kb upstream 1.0kb upstream 4340 true Chr08: 9931163-9935502 Phaseolus vulgaris
Phvul.008G096600 1.0kb upstream 1.0kb upstream 1000 false Chr08: 9934503-9935502 Phaseolus vulgaris
Phvul.008G096600 1.0kb downstream 1.0kb downstream 4340 true Chr08: 9930163-9934502 Phaseolus vulgaris
Phvul.008G096600 1.0kb downstream 1.0kb downstream 1000 false Chr08: 9930163-9931162 Phaseolus vulgaris
Phvul.008G096600 2.0kb upstream 2.0kb upstream 5340 true Chr08: 9931163-9936502 Phaseolus vulgaris
Phvul.008G096600 2.0kb upstream 2.0kb upstream 2000 false Chr08: 9934503-9936502 Phaseolus vulgaris
Phvul.008G096600 2.0kb downstream 2.0kb downstream 5340 true Chr08: 9929163-9934502 Phaseolus vulgaris
Phvul.008G096600 2.0kb downstream 2.0kb downstream 2000 false Chr08: 9929163-9931162 Phaseolus vulgaris
Phvul.008G096600 5.0kb upstream 5.0kb upstream 8340 true Chr08: 9931163-9939502 Phaseolus vulgaris
Phvul.008G096600 5.0kb upstream 5.0kb upstream 5000 false Chr08: 9934503-9939502 Phaseolus vulgaris
Phvul.008G096600 5.0kb downstream 5.0kb downstream 8340 true Chr08: 9926163-9934502 Phaseolus vulgaris
Phvul.008G096600 5.0kb downstream 5.0kb downstream 5000 false Chr08: 9926163-9931162 Phaseolus vulgaris
Phvul.008G096600 10.0kb upstream 10.0kb upstream 13340 true Chr08: 9931163-9944502 Phaseolus vulgaris
Phvul.008G096600 10.0kb upstream 10.0kb upstream 10000 false Chr08: 9934503-9944502 Phaseolus vulgaris
Phvul.008G096600 10.0kb downstream 10.0kb downstream 13340 true Chr08: 9921163-9934502 Phaseolus vulgaris
Phvul.008G096600 10.0kb downstream 10.0kb downstream 10000 false Chr08: 9921163-9931162 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122307962 5265 Fabidae View MSA
124068864 5270 Rosid View MSA
123740394 5271 Pentapetalae View MSA
122793791 5272 Eudicot View MSA
122046621 5273 Angiosperm View MSA
121343822 5274 Embryophyte View MSA
123427619 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.0956 0.0 9.73223    
cufflinks 5.21261 0.0 15.4722   High
cufflinks 1.78016 0.0 5.95993   Low
cufflinks 3.74182 0.0 11.6362    
cufflinks 3.50832 0.0 11.0049    
cufflinks 1.77232 0.0 5.94216   Low
cufflinks 3.01219 0.0 9.46989    
cufflinks 4.76325 0.0 14.1429   High
cufflinks 4.54921 0.0 13.7066    
cufflinks 2.3024 0.0 7.52501    
cufflinks 3.06158 0.0 9.70053    

0 Strain