Gene : Phvul.008G098200 P. vulgaris v2.1
Defline:  (1 of 2) PTHR35499:SF2 - ALC-INTERACTING PROTEIN 1 Genomic Order:  993
Name:  ? Phvul.008G098200 Secondary Identifier:  ? PAC:37157600
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0 Pathways

Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.008G098200 0.5kb upstream 0.5kb upstream 2140 true Chr08: 10206897-10209036 Phaseolus vulgaris
Phvul.008G098200 0.5kb upstream 0.5kb upstream 500 false Chr08: 10206897-10207396 Phaseolus vulgaris
Phvul.008G098200 0.5kb downstream 0.5kb downstream 2140 true Chr08: 10207397-10209536 Phaseolus vulgaris
Phvul.008G098200 0.5kb downstream 0.5kb downstream 500 false Chr08: 10209037-10209536 Phaseolus vulgaris
Phvul.008G098200 1.0kb upstream 1.0kb upstream 2640 true Chr08: 10206397-10209036 Phaseolus vulgaris
Phvul.008G098200 1.0kb upstream 1.0kb upstream 1000 false Chr08: 10206397-10207396 Phaseolus vulgaris
Phvul.008G098200 1.0kb downstream 1.0kb downstream 2640 true Chr08: 10207397-10210036 Phaseolus vulgaris
Phvul.008G098200 1.0kb downstream 1.0kb downstream 1000 false Chr08: 10209037-10210036 Phaseolus vulgaris
Phvul.008G098200 2.0kb upstream 2.0kb upstream 3640 true Chr08: 10205397-10209036 Phaseolus vulgaris
Phvul.008G098200 2.0kb upstream 2.0kb upstream 2000 false Chr08: 10205397-10207396 Phaseolus vulgaris
Phvul.008G098200 2.0kb downstream 2.0kb downstream 3640 true Chr08: 10207397-10211036 Phaseolus vulgaris
Phvul.008G098200 2.0kb downstream 2.0kb downstream 2000 false Chr08: 10209037-10211036 Phaseolus vulgaris
Phvul.008G098200 5.0kb upstream 5.0kb upstream 6640 true Chr08: 10202397-10209036 Phaseolus vulgaris
Phvul.008G098200 5.0kb upstream 5.0kb upstream 5000 false Chr08: 10202397-10207396 Phaseolus vulgaris
Phvul.008G098200 5.0kb downstream 5.0kb downstream 6640 true Chr08: 10207397-10214036 Phaseolus vulgaris
Phvul.008G098200 5.0kb downstream 5.0kb downstream 5000 false Chr08: 10209037-10214036 Phaseolus vulgaris
Phvul.008G098200 10.0kb upstream 10.0kb upstream 11640 true Chr08: 10197397-10209036 Phaseolus vulgaris
Phvul.008G098200 10.0kb upstream 10.0kb upstream 10000 false Chr08: 10197397-10207396 Phaseolus vulgaris
Phvul.008G098200 10.0kb downstream 10.0kb downstream 11640 true Chr08: 10207397-10219036 Phaseolus vulgaris
Phvul.008G098200 10.0kb downstream 10.0kb downstream 10000 false Chr08: 10209037-10219036 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122309323 5265 Fabidae View MSA
124062218 5270 Rosid View MSA
123751087 5271 Pentapetalae View MSA
122789400 5272 Eudicot View MSA
122050315 5273 Angiosperm View MSA
121311850 5274 Embryophyte View MSA
123349090 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.366115 0.0 1.42005 Low High
cufflinks 0.121727 0.0 0.516077 Low  
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.203957 0.0 0.832321 Low  
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.498702 0.0 1.88586 Low High
cufflinks 0.111625 0.0 0.475236 Low  
cufflinks 0.0400539 0.0 0.18802 Low Low
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.109076 0.0 0.469432 Low  

0 Strain