Gene : Phvul.008G080600 P. vulgaris v2.1
Defline:  (1 of 1) KOG0982 - Centrosomal protein Nuf Genomic Order:  833
Name:  ? Phvul.008G080600 Secondary Identifier:  ? PAC:37159244
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Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.008G080600 0.5kb upstream 0.5kb upstream 8670 true Chr08: 7817681-7826350 Phaseolus vulgaris
Phvul.008G080600 0.5kb upstream 0.5kb upstream 500 false Chr08: 7825851-7826350 Phaseolus vulgaris
Phvul.008G080600 0.5kb downstream 0.5kb downstream 8670 true Chr08: 7817181-7825850 Phaseolus vulgaris
Phvul.008G080600 0.5kb downstream 0.5kb downstream 500 false Chr08: 7817181-7817680 Phaseolus vulgaris
Phvul.008G080600 1.0kb upstream 1.0kb upstream 9170 true Chr08: 7817681-7826850 Phaseolus vulgaris
Phvul.008G080600 1.0kb upstream 1.0kb upstream 1000 false Chr08: 7825851-7826850 Phaseolus vulgaris
Phvul.008G080600 1.0kb downstream 1.0kb downstream 9170 true Chr08: 7816681-7825850 Phaseolus vulgaris
Phvul.008G080600 1.0kb downstream 1.0kb downstream 1000 false Chr08: 7816681-7817680 Phaseolus vulgaris
Phvul.008G080600 2.0kb upstream 2.0kb upstream 10170 true Chr08: 7817681-7827850 Phaseolus vulgaris
Phvul.008G080600 2.0kb upstream 2.0kb upstream 2000 false Chr08: 7825851-7827850 Phaseolus vulgaris
Phvul.008G080600 2.0kb downstream 2.0kb downstream 10170 true Chr08: 7815681-7825850 Phaseolus vulgaris
Phvul.008G080600 2.0kb downstream 2.0kb downstream 2000 false Chr08: 7815681-7817680 Phaseolus vulgaris
Phvul.008G080600 5.0kb upstream 5.0kb upstream 13170 true Chr08: 7817681-7830850 Phaseolus vulgaris
Phvul.008G080600 5.0kb upstream 5.0kb upstream 5000 false Chr08: 7825851-7830850 Phaseolus vulgaris
Phvul.008G080600 5.0kb downstream 5.0kb downstream 13170 true Chr08: 7812681-7825850 Phaseolus vulgaris
Phvul.008G080600 5.0kb downstream 5.0kb downstream 5000 false Chr08: 7812681-7817680 Phaseolus vulgaris
Phvul.008G080600 10.0kb upstream 10.0kb upstream 18170 true Chr08: 7817681-7835850 Phaseolus vulgaris
Phvul.008G080600 10.0kb upstream 10.0kb upstream 10000 false Chr08: 7825851-7835850 Phaseolus vulgaris
Phvul.008G080600 10.0kb downstream 10.0kb downstream 18170 true Chr08: 7807681-7825850 Phaseolus vulgaris
Phvul.008G080600 10.0kb downstream 10.0kb downstream 10000 false Chr08: 7807681-7817680 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122296247 5265 Fabidae View MSA
124069018 5270 Rosid View MSA
123737080 5271 Pentapetalae View MSA
122788816 5272 Eudicot View MSA
122046561 5273 Angiosperm View MSA
121310623 5274 Embryophyte View MSA
123348060 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.15906 0.0 9.86298   Low
cufflinks 4.70728 0.0 17.4886    
cufflinks 11.8715 0.0 42.3256   High
cufflinks 3.10153 0.0 13.3025   Low
cufflinks 4.2113 0.0 16.5833    
cufflinks 10.9892 0.0 39.8104   High
cufflinks 6.93192 0.0 24.4515    
cufflinks 8.55828 0.0 31.3571    
cufflinks 5.69102 0.0 22.8276    
cufflinks 6.48493 0.0 25.508    
cufflinks 4.48306 0.0 17.0516    

0 Strain