Gene : Phvul.008G079100 P. vulgaris v2.1
Defline:  (1 of 1) K03945 - NADH dehydrogenase (ubiquinone) 1 alpha subcomplex subunit 1 (NDUFA1) Genomic Order:  817
Name:  ? Phvul.008G079100 Secondary Identifier:  ? PAC:37159665
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Sequence Feature Displayer

Ontology Annotation Displayer

3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Pvulgaris PWY-3781 Phaseolus vulgaris pathologic  
Pvulgaris PWY-4302 Phaseolus vulgaris pathologic  
Pvulgaris PWY-5083 Phaseolus vulgaris pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.008G079100 0.5kb upstream 0.5kb upstream 2750 true Chr08: 7694834-7697583 Phaseolus vulgaris
Phvul.008G079100 0.5kb upstream 0.5kb upstream 500 false Chr08: 7697084-7697583 Phaseolus vulgaris
Phvul.008G079100 0.5kb downstream 0.5kb downstream 2750 true Chr08: 7694334-7697083 Phaseolus vulgaris
Phvul.008G079100 0.5kb downstream 0.5kb downstream 500 false Chr08: 7694334-7694833 Phaseolus vulgaris
Phvul.008G079100 1.0kb upstream 1.0kb upstream 3250 true Chr08: 7694834-7698083 Phaseolus vulgaris
Phvul.008G079100 1.0kb upstream 1.0kb upstream 1000 false Chr08: 7697084-7698083 Phaseolus vulgaris
Phvul.008G079100 1.0kb downstream 1.0kb downstream 3250 true Chr08: 7693834-7697083 Phaseolus vulgaris
Phvul.008G079100 1.0kb downstream 1.0kb downstream 1000 false Chr08: 7693834-7694833 Phaseolus vulgaris
Phvul.008G079100 2.0kb upstream 2.0kb upstream 4250 true Chr08: 7694834-7699083 Phaseolus vulgaris
Phvul.008G079100 2.0kb upstream 2.0kb upstream 2000 false Chr08: 7697084-7699083 Phaseolus vulgaris
Phvul.008G079100 2.0kb downstream 2.0kb downstream 4250 true Chr08: 7692834-7697083 Phaseolus vulgaris
Phvul.008G079100 2.0kb downstream 2.0kb downstream 2000 false Chr08: 7692834-7694833 Phaseolus vulgaris
Phvul.008G079100 5.0kb upstream 5.0kb upstream 7250 true Chr08: 7694834-7702083 Phaseolus vulgaris
Phvul.008G079100 5.0kb upstream 5.0kb upstream 5000 false Chr08: 7697084-7702083 Phaseolus vulgaris
Phvul.008G079100 5.0kb downstream 5.0kb downstream 7250 true Chr08: 7689834-7697083 Phaseolus vulgaris
Phvul.008G079100 5.0kb downstream 5.0kb downstream 5000 false Chr08: 7689834-7694833 Phaseolus vulgaris
Phvul.008G079100 10.0kb upstream 10.0kb upstream 12250 true Chr08: 7694834-7707083 Phaseolus vulgaris
Phvul.008G079100 10.0kb upstream 10.0kb upstream 10000 false Chr08: 7697084-7707083 Phaseolus vulgaris
Phvul.008G079100 10.0kb downstream 10.0kb downstream 12250 true Chr08: 7684834-7697083 Phaseolus vulgaris
Phvul.008G079100 10.0kb downstream 10.0kb downstream 10000 false Chr08: 7684834-7694833 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122026299 5273 Angiosperm View MSA
122299728 5265 Fabidae View MSA
124063685 5270 Rosid View MSA
123737855 5271 Pentapetalae View MSA
122792879 5272 Eudicot View MSA
121345909 5274 Embryophyte View MSA
123427209 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 89.1896 0.0 230.704 High  
cufflinks 58.8773 0.0 153.986 High  
cufflinks 42.5749 0.0 113.736 High  
cufflinks 165.806 0.0 432.753 High High
cufflinks 65.1672 0.0 170.12 High  
cufflinks 33.1759 0.0 90.4279 High Low
cufflinks 41.8208 0.0 111.841 High  
cufflinks 66.4734 0.0 172.773 High  
cufflinks 52.7105 0.0 138.85 High  
cufflinks 28.0095 0.0 77.3374   Low
cufflinks 74.7473 0.0 194.011 High  

0 Strain