Gene : Phvul.008G081500 P. vulgaris v2.1
Genomic Order:  842 Name:  ? Phvul.008G081500
Secondary Identifier:  ? PAC:37157729
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Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.008G081500 0.5kb upstream 0.5kb upstream 5050 true Chr08: 7904467-7909516 Phaseolus vulgaris
Phvul.008G081500 0.5kb upstream 0.5kb upstream 500 false Chr08: 7904467-7904966 Phaseolus vulgaris
Phvul.008G081500 0.5kb downstream 0.5kb downstream 5050 true Chr08: 7904967-7910016 Phaseolus vulgaris
Phvul.008G081500 0.5kb downstream 0.5kb downstream 500 false Chr08: 7909517-7910016 Phaseolus vulgaris
Phvul.008G081500 1.0kb upstream 1.0kb upstream 5550 true Chr08: 7903967-7909516 Phaseolus vulgaris
Phvul.008G081500 1.0kb upstream 1.0kb upstream 1000 false Chr08: 7903967-7904966 Phaseolus vulgaris
Phvul.008G081500 1.0kb downstream 1.0kb downstream 5550 true Chr08: 7904967-7910516 Phaseolus vulgaris
Phvul.008G081500 1.0kb downstream 1.0kb downstream 1000 false Chr08: 7909517-7910516 Phaseolus vulgaris
Phvul.008G081500 2.0kb upstream 2.0kb upstream 6550 true Chr08: 7902967-7909516 Phaseolus vulgaris
Phvul.008G081500 2.0kb upstream 2.0kb upstream 2000 false Chr08: 7902967-7904966 Phaseolus vulgaris
Phvul.008G081500 2.0kb downstream 2.0kb downstream 6550 true Chr08: 7904967-7911516 Phaseolus vulgaris
Phvul.008G081500 2.0kb downstream 2.0kb downstream 2000 false Chr08: 7909517-7911516 Phaseolus vulgaris
Phvul.008G081500 5.0kb upstream 5.0kb upstream 9550 true Chr08: 7899967-7909516 Phaseolus vulgaris
Phvul.008G081500 5.0kb upstream 5.0kb upstream 5000 false Chr08: 7899967-7904966 Phaseolus vulgaris
Phvul.008G081500 5.0kb downstream 5.0kb downstream 9550 true Chr08: 7904967-7914516 Phaseolus vulgaris
Phvul.008G081500 5.0kb downstream 5.0kb downstream 5000 false Chr08: 7909517-7914516 Phaseolus vulgaris
Phvul.008G081500 10.0kb upstream 10.0kb upstream 14550 true Chr08: 7894967-7909516 Phaseolus vulgaris
Phvul.008G081500 10.0kb upstream 10.0kb upstream 10000 false Chr08: 7894967-7904966 Phaseolus vulgaris
Phvul.008G081500 10.0kb downstream 10.0kb downstream 14550 true Chr08: 7904967-7919516 Phaseolus vulgaris
Phvul.008G081500 10.0kb downstream 10.0kb downstream 10000 false Chr08: 7909517-7919516 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122308167 5265 Fabidae View MSA
124068800 5270 Rosid View MSA
123741446 5271 Pentapetalae View MSA
122794824 5272 Eudicot View MSA
122042245 5273 Angiosperm View MSA
121309940 5274 Embryophyte View MSA
123425461 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 9.32485 0.0 25.4622    
cufflinks 3.81762 0.0 11.4719   Low
cufflinks 17.3992 0.0 45.56   High
cufflinks 4.69926 0.0 13.8759    
cufflinks 7.73683 0.0 21.621    
cufflinks 6.12966 0.0 17.4818    
cufflinks 6.13765 0.0 17.4886    
cufflinks 3.78229 0.0 11.3407   Low
cufflinks 4.81771 0.0 14.126    
cufflinks 5.92238 0.0 16.9636    
cufflinks 5.82591 0.0 16.7394    

0 Strain