Gene : Phvul.008G082300 P. vulgaris v2.1
Defline:  (1 of 1) PTHR12668:SF19 - NON-GREEN PLASTID INNER ENVELOPE MEMBRANE PROTEIN-RELATED Genomic Order:  850
Name:  ? Phvul.008G082300 Secondary Identifier:  ? PAC:37158889
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Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.008G082300 0.5kb upstream 0.5kb upstream 4664 true Chr08: 8017873-8022536 Phaseolus vulgaris
Phvul.008G082300 0.5kb upstream 0.5kb upstream 500 false Chr08: 8022037-8022536 Phaseolus vulgaris
Phvul.008G082300 0.5kb downstream 0.5kb downstream 4664 true Chr08: 8017373-8022036 Phaseolus vulgaris
Phvul.008G082300 0.5kb downstream 0.5kb downstream 500 false Chr08: 8017373-8017872 Phaseolus vulgaris
Phvul.008G082300 1.0kb upstream 1.0kb upstream 5164 true Chr08: 8017873-8023036 Phaseolus vulgaris
Phvul.008G082300 1.0kb upstream 1.0kb upstream 1000 false Chr08: 8022037-8023036 Phaseolus vulgaris
Phvul.008G082300 1.0kb downstream 1.0kb downstream 5164 true Chr08: 8016873-8022036 Phaseolus vulgaris
Phvul.008G082300 1.0kb downstream 1.0kb downstream 1000 false Chr08: 8016873-8017872 Phaseolus vulgaris
Phvul.008G082300 2.0kb upstream 2.0kb upstream 6164 true Chr08: 8017873-8024036 Phaseolus vulgaris
Phvul.008G082300 2.0kb upstream 2.0kb upstream 2000 false Chr08: 8022037-8024036 Phaseolus vulgaris
Phvul.008G082300 2.0kb downstream 2.0kb downstream 6164 true Chr08: 8015873-8022036 Phaseolus vulgaris
Phvul.008G082300 2.0kb downstream 2.0kb downstream 2000 false Chr08: 8015873-8017872 Phaseolus vulgaris
Phvul.008G082300 5.0kb upstream 5.0kb upstream 9164 true Chr08: 8017873-8027036 Phaseolus vulgaris
Phvul.008G082300 5.0kb upstream 5.0kb upstream 5000 false Chr08: 8022037-8027036 Phaseolus vulgaris
Phvul.008G082300 5.0kb downstream 5.0kb downstream 9164 true Chr08: 8012873-8022036 Phaseolus vulgaris
Phvul.008G082300 5.0kb downstream 5.0kb downstream 5000 false Chr08: 8012873-8017872 Phaseolus vulgaris
Phvul.008G082300 10.0kb upstream 10.0kb upstream 14164 true Chr08: 8017873-8032036 Phaseolus vulgaris
Phvul.008G082300 10.0kb upstream 10.0kb upstream 10000 false Chr08: 8022037-8032036 Phaseolus vulgaris
Phvul.008G082300 10.0kb downstream 10.0kb downstream 14164 true Chr08: 8007873-8022036 Phaseolus vulgaris
Phvul.008G082300 10.0kb downstream 10.0kb downstream 10000 false Chr08: 8007873-8017872 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122305049 5265 Fabidae View MSA
124066225 5270 Rosid View MSA
123738193 5271 Pentapetalae View MSA
122789791 5272 Eudicot View MSA
122046844 5273 Angiosperm View MSA
121351316 5274 Embryophyte View MSA
123426664 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 32.778 0.0 84.8942    
cufflinks 41.1483 0.0 107.223 High  
cufflinks 44.7812 0.0 117.062 High High
cufflinks 38.8531 0.0 101.1 High  
cufflinks 35.7632 0.0 92.7387 High  
cufflinks 39.5991 0.0 103.064 High  
cufflinks 21.1949 0.0 54.8823   Low
cufflinks 29.2563 0.0 75.6537 High  
cufflinks 24.7135 0.0 63.8922   Low
cufflinks 34.4502 0.0 89.2972    
cufflinks 31.9981 0.0 82.838    

0 Strain