Gene : Phvul.008G073200 P. vulgaris v2.1
Defline:  (1 of 3) 1.10.3.1 - Catechol oxidase / Tyrosinase Genomic Order:  756
Name:  ? Phvul.008G073200 Secondary Identifier:  ? PAC:37159321
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Pvulgaris PWY-6752 Phaseolus vulgaris pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.008G073200 0.5kb upstream 0.5kb upstream 2419 true Chr08: 6905091-6907509 Phaseolus vulgaris
Phvul.008G073200 0.5kb upstream 0.5kb upstream 500 false Chr08: 6907010-6907509 Phaseolus vulgaris
Phvul.008G073200 0.5kb downstream 0.5kb downstream 2419 true Chr08: 6904591-6907009 Phaseolus vulgaris
Phvul.008G073200 0.5kb downstream 0.5kb downstream 500 false Chr08: 6904591-6905090 Phaseolus vulgaris
Phvul.008G073200 1.0kb upstream 1.0kb upstream 2919 true Chr08: 6905091-6908009 Phaseolus vulgaris
Phvul.008G073200 1.0kb upstream 1.0kb upstream 1000 false Chr08: 6907010-6908009 Phaseolus vulgaris
Phvul.008G073200 1.0kb downstream 1.0kb downstream 2919 true Chr08: 6904091-6907009 Phaseolus vulgaris
Phvul.008G073200 1.0kb downstream 1.0kb downstream 1000 false Chr08: 6904091-6905090 Phaseolus vulgaris
Phvul.008G073200 2.0kb upstream 2.0kb upstream 3919 true Chr08: 6905091-6909009 Phaseolus vulgaris
Phvul.008G073200 2.0kb upstream 2.0kb upstream 2000 false Chr08: 6907010-6909009 Phaseolus vulgaris
Phvul.008G073200 2.0kb downstream 2.0kb downstream 3919 true Chr08: 6903091-6907009 Phaseolus vulgaris
Phvul.008G073200 2.0kb downstream 2.0kb downstream 2000 false Chr08: 6903091-6905090 Phaseolus vulgaris
Phvul.008G073200 5.0kb upstream 5.0kb upstream 6919 true Chr08: 6905091-6912009 Phaseolus vulgaris
Phvul.008G073200 5.0kb upstream 5.0kb upstream 5000 false Chr08: 6907010-6912009 Phaseolus vulgaris
Phvul.008G073200 5.0kb downstream 5.0kb downstream 6919 true Chr08: 6900091-6907009 Phaseolus vulgaris
Phvul.008G073200 5.0kb downstream 5.0kb downstream 5000 false Chr08: 6900091-6905090 Phaseolus vulgaris
Phvul.008G073200 10.0kb upstream 10.0kb upstream 11919 true Chr08: 6905091-6917009 Phaseolus vulgaris
Phvul.008G073200 10.0kb upstream 10.0kb upstream 10000 false Chr08: 6907010-6917009 Phaseolus vulgaris
Phvul.008G073200 10.0kb downstream 10.0kb downstream 11919 true Chr08: 6895091-6907009 Phaseolus vulgaris
Phvul.008G073200 10.0kb downstream 10.0kb downstream 10000 false Chr08: 6895091-6905090 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121617703 5273 Angiosperm View MSA
122253938 5265 Fabidae View MSA
123996317 5270 Rosid View MSA
123570811 5271 Pentapetalae View MSA
122605545 5272 Eudicot View MSA
121350975 5274 Embryophyte View MSA
123428097 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.21869 0.0 4.07114    
cufflinks 0.0169217 0.0 0.0845174 Low Low
cufflinks 23.9557 0.0 61.921   High
cufflinks 0.527066 0.0 1.93491 Low  
cufflinks 0.191312 0.0 0.762316 Low  
cufflinks 31.1567 0.0 80.737   High
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0220355 0.0 0.10703 Low Low
cufflinks 0.105748 0.0 0.440533 Low  
cufflinks 0.169265 0.0 0.679978 Low  

0 Strain