Gene : Phvul.008G074100 P. vulgaris v2.1
Defline:  (1 of 2) PTHR10774:SF51 - C2 CALCIUM/LIPID-BINDING ENDONUCLEASE/EXONUCLEASE/PHOSPHATASE-RELATED Genomic Order:  765
Name:  ? Phvul.008G074100 Secondary Identifier:  ? PAC:37158819
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

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Gene Structure Displayer

Expression

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Cufflinks Score Displayer

 

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.008G074100 0.5kb upstream 0.5kb upstream 9199 true Chr08: 7022615-7031813 Phaseolus vulgaris
Phvul.008G074100 0.5kb upstream 0.5kb upstream 500 false Chr08: 7031314-7031813 Phaseolus vulgaris
Phvul.008G074100 0.5kb downstream 0.5kb downstream 9199 true Chr08: 7022115-7031313 Phaseolus vulgaris
Phvul.008G074100 0.5kb downstream 0.5kb downstream 500 false Chr08: 7022115-7022614 Phaseolus vulgaris
Phvul.008G074100 1.0kb upstream 1.0kb upstream 9699 true Chr08: 7022615-7032313 Phaseolus vulgaris
Phvul.008G074100 1.0kb upstream 1.0kb upstream 1000 false Chr08: 7031314-7032313 Phaseolus vulgaris
Phvul.008G074100 1.0kb downstream 1.0kb downstream 9699 true Chr08: 7021615-7031313 Phaseolus vulgaris
Phvul.008G074100 1.0kb downstream 1.0kb downstream 1000 false Chr08: 7021615-7022614 Phaseolus vulgaris
Phvul.008G074100 2.0kb upstream 2.0kb upstream 10699 true Chr08: 7022615-7033313 Phaseolus vulgaris
Phvul.008G074100 2.0kb upstream 2.0kb upstream 2000 false Chr08: 7031314-7033313 Phaseolus vulgaris
Phvul.008G074100 2.0kb downstream 2.0kb downstream 10699 true Chr08: 7020615-7031313 Phaseolus vulgaris
Phvul.008G074100 2.0kb downstream 2.0kb downstream 2000 false Chr08: 7020615-7022614 Phaseolus vulgaris
Phvul.008G074100 5.0kb upstream 5.0kb upstream 13699 true Chr08: 7022615-7036313 Phaseolus vulgaris
Phvul.008G074100 5.0kb upstream 5.0kb upstream 5000 false Chr08: 7031314-7036313 Phaseolus vulgaris
Phvul.008G074100 5.0kb downstream 5.0kb downstream 13699 true Chr08: 7017615-7031313 Phaseolus vulgaris
Phvul.008G074100 5.0kb downstream 5.0kb downstream 5000 false Chr08: 7017615-7022614 Phaseolus vulgaris
Phvul.008G074100 10.0kb upstream 10.0kb upstream 18699 true Chr08: 7022615-7041313 Phaseolus vulgaris
Phvul.008G074100 10.0kb upstream 10.0kb upstream 10000 false Chr08: 7031314-7041313 Phaseolus vulgaris
Phvul.008G074100 10.0kb downstream 10.0kb downstream 18699 true Chr08: 7012615-7031313 Phaseolus vulgaris
Phvul.008G074100 10.0kb downstream 10.0kb downstream 10000 false Chr08: 7012615-7022614 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122310033 5265 Fabidae View MSA
124067167 5270 Rosid View MSA
123748686 5271 Pentapetalae View MSA
122791345 5272 Eudicot View MSA
122044587 5273 Angiosperm View MSA
123429031 5275 Viridiplantae View MSA
121346327 5274 Embryophyte View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.2029 0.0 0.975694 Low Low
cufflinks 0.75882 0.0 3.06271    
cufflinks 2.0781 0.0 8.36254    
cufflinks 1.16932 0.0 4.23592    
cufflinks 1.33453 0.0 4.66369    
cufflinks 1.31271 0.0 5.79958    
cufflinks 1.03466 0.0 4.91348    
cufflinks 2.08081 0.0 6.55489    
cufflinks 1.4695 0.0 5.04751    
cufflinks 1.13585 0.0 5.29306    
cufflinks 1.44545 0.0 6.38949    

0 Strain