Gene : Phvul.008G076400 P. vulgaris v2.1
Defline:  (1 of 1) PTHR22847//PTHR22847:SF358 - WD40 REPEAT PROTEIN // SUBFAMILY NOT NAMED Genomic Order:  788
Name:  ? Phvul.008G076400 Secondary Identifier:  ? PAC:37157635
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0 Pathways

Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.008G076400 0.5kb upstream 0.5kb upstream 8107 true Chr08: 7373318-7381424 Phaseolus vulgaris
Phvul.008G076400 0.5kb upstream 0.5kb upstream 500 false Chr08: 7380925-7381424 Phaseolus vulgaris
Phvul.008G076400 0.5kb downstream 0.5kb downstream 8107 true Chr08: 7372818-7380924 Phaseolus vulgaris
Phvul.008G076400 0.5kb downstream 0.5kb downstream 500 false Chr08: 7372818-7373317 Phaseolus vulgaris
Phvul.008G076400 1.0kb upstream 1.0kb upstream 8607 true Chr08: 7373318-7381924 Phaseolus vulgaris
Phvul.008G076400 1.0kb upstream 1.0kb upstream 1000 false Chr08: 7380925-7381924 Phaseolus vulgaris
Phvul.008G076400 1.0kb downstream 1.0kb downstream 8607 true Chr08: 7372318-7380924 Phaseolus vulgaris
Phvul.008G076400 1.0kb downstream 1.0kb downstream 1000 false Chr08: 7372318-7373317 Phaseolus vulgaris
Phvul.008G076400 2.0kb upstream 2.0kb upstream 9607 true Chr08: 7373318-7382924 Phaseolus vulgaris
Phvul.008G076400 2.0kb upstream 2.0kb upstream 2000 false Chr08: 7380925-7382924 Phaseolus vulgaris
Phvul.008G076400 2.0kb downstream 2.0kb downstream 9607 true Chr08: 7371318-7380924 Phaseolus vulgaris
Phvul.008G076400 2.0kb downstream 2.0kb downstream 2000 false Chr08: 7371318-7373317 Phaseolus vulgaris
Phvul.008G076400 5.0kb upstream 5.0kb upstream 12607 true Chr08: 7373318-7385924 Phaseolus vulgaris
Phvul.008G076400 5.0kb upstream 5.0kb upstream 5000 false Chr08: 7380925-7385924 Phaseolus vulgaris
Phvul.008G076400 5.0kb downstream 5.0kb downstream 12607 true Chr08: 7368318-7380924 Phaseolus vulgaris
Phvul.008G076400 5.0kb downstream 5.0kb downstream 5000 false Chr08: 7368318-7373317 Phaseolus vulgaris
Phvul.008G076400 10.0kb upstream 10.0kb upstream 17607 true Chr08: 7373318-7390924 Phaseolus vulgaris
Phvul.008G076400 10.0kb upstream 10.0kb upstream 10000 false Chr08: 7380925-7390924 Phaseolus vulgaris
Phvul.008G076400 10.0kb downstream 10.0kb downstream 17607 true Chr08: 7363318-7380924 Phaseolus vulgaris
Phvul.008G076400 10.0kb downstream 10.0kb downstream 10000 false Chr08: 7363318-7373317 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122307428 5265 Fabidae View MSA
124067221 5270 Rosid View MSA
123739645 5271 Pentapetalae View MSA
122792719 5272 Eudicot View MSA
122047366 5273 Angiosperm View MSA
121345194 5274 Embryophyte View MSA
123425476 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 10.2877 0.0 27.7841   Low
cufflinks 16.7576 0.0 43.8465   High
cufflinks 11.3251 0.0 30.3365    
cufflinks 15.0973 0.0 39.7919    
cufflinks 11.9378 0.0 32.015    
cufflinks 8.83191 0.0 24.1992   Low
cufflinks 12.3696 0.0 33.0149    
cufflinks 15.9374 0.0 41.7608   High
cufflinks 16.6973 0.0 43.7723   High
cufflinks 12.8211 0.0 34.119    
cufflinks 11.8362 0.0 31.7713    

0 Strain