Gene : Phvul.008G076450 P. vulgaris v2.1
Defline:  (1 of 6) PTHR10366:SF425 - BRASSINOSTEROID METABOLIC PATHWAY PROTEIN BEN1 Genomic Order:  789
Name:  ? Phvul.008G076450 Secondary Identifier:  ? PAC:37160832
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Sequence Feature Displayer

Ontology Annotation Displayer

5 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Pvulgaris PWY-2229 Phaseolus vulgaris pathologic  
Pvulgaris PWY-2463 Phaseolus vulgaris pathologic  
Pvulgaris PWY-2464 Phaseolus vulgaris pathologic  
Pvulgaris PWY-2761 Phaseolus vulgaris pathologic  
Pvulgaris PWY-5717 Phaseolus vulgaris pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.008G076450 0.5kb upstream 0.5kb upstream 2640 true Chr08: 7382719-7385358 Phaseolus vulgaris
Phvul.008G076450 0.5kb upstream 0.5kb upstream 500 false Chr08: 7384859-7385358 Phaseolus vulgaris
Phvul.008G076450 0.5kb downstream 0.5kb downstream 2640 true Chr08: 7382219-7384858 Phaseolus vulgaris
Phvul.008G076450 0.5kb downstream 0.5kb downstream 500 false Chr08: 7382219-7382718 Phaseolus vulgaris
Phvul.008G076450 1.0kb upstream 1.0kb upstream 3140 true Chr08: 7382719-7385858 Phaseolus vulgaris
Phvul.008G076450 1.0kb upstream 1.0kb upstream 1000 false Chr08: 7384859-7385858 Phaseolus vulgaris
Phvul.008G076450 1.0kb downstream 1.0kb downstream 3140 true Chr08: 7381719-7384858 Phaseolus vulgaris
Phvul.008G076450 1.0kb downstream 1.0kb downstream 1000 false Chr08: 7381719-7382718 Phaseolus vulgaris
Phvul.008G076450 2.0kb upstream 2.0kb upstream 4140 true Chr08: 7382719-7386858 Phaseolus vulgaris
Phvul.008G076450 2.0kb upstream 2.0kb upstream 2000 false Chr08: 7384859-7386858 Phaseolus vulgaris
Phvul.008G076450 2.0kb downstream 2.0kb downstream 4140 true Chr08: 7380719-7384858 Phaseolus vulgaris
Phvul.008G076450 2.0kb downstream 2.0kb downstream 2000 false Chr08: 7380719-7382718 Phaseolus vulgaris
Phvul.008G076450 5.0kb upstream 5.0kb upstream 7140 true Chr08: 7382719-7389858 Phaseolus vulgaris
Phvul.008G076450 5.0kb upstream 5.0kb upstream 5000 false Chr08: 7384859-7389858 Phaseolus vulgaris
Phvul.008G076450 5.0kb downstream 5.0kb downstream 7140 true Chr08: 7377719-7384858 Phaseolus vulgaris
Phvul.008G076450 5.0kb downstream 5.0kb downstream 5000 false Chr08: 7377719-7382718 Phaseolus vulgaris
Phvul.008G076450 10.0kb upstream 10.0kb upstream 12140 true Chr08: 7382719-7394858 Phaseolus vulgaris
Phvul.008G076450 10.0kb upstream 10.0kb upstream 10000 false Chr08: 7384859-7394858 Phaseolus vulgaris
Phvul.008G076450 10.0kb downstream 10.0kb downstream 12140 true Chr08: 7372719-7384858 Phaseolus vulgaris
Phvul.008G076450 10.0kb downstream 10.0kb downstream 10000 false Chr08: 7372719-7382718 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122031301 5273 Angiosperm View MSA
122314530 5265 Fabidae View MSA
124066855 5270 Rosid View MSA
123745083 5271 Pentapetalae View MSA
122790638 5272 Eudicot View MSA
121300366 5274 Embryophyte View MSA
123428289 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.58802 0.0 4.87481    
cufflinks 0.132109 0.0 0.56901 Low  
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0627313 0.0 0.301502 Low Low
cufflinks 0.8394 0.0 6.39455    
cufflinks 0.0144616 0.0 0.148372 Low Low
cufflinks 1.51742 0.0 8.25305    
cufflinks 1.40474 0.0 9.53653    
cufflinks 3.57857 0.0 15.5212   High
cufflinks 0.402836 0.0 1.57962    
cufflinks 0.201912 0.0 0.836135 Low  

0 Strain