Gene : Phvul.008G061600 P. vulgaris v2.1
Genomic Order:  636 Name:  ? Phvul.008G061600
Secondary Identifier:  ? PAC:37159354
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0 Pathways

Genomics

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Expression

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Cufflinks Score Displayer

 

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.008G061600 0.5kb upstream 0.5kb upstream 4486 true Chr08: 5579833-5584318 Phaseolus vulgaris
Phvul.008G061600 0.5kb upstream 0.5kb upstream 500 false Chr08: 5583819-5584318 Phaseolus vulgaris
Phvul.008G061600 0.5kb downstream 0.5kb downstream 4486 true Chr08: 5579333-5583818 Phaseolus vulgaris
Phvul.008G061600 0.5kb downstream 0.5kb downstream 500 false Chr08: 5579333-5579832 Phaseolus vulgaris
Phvul.008G061600 1.0kb upstream 1.0kb upstream 4986 true Chr08: 5579833-5584818 Phaseolus vulgaris
Phvul.008G061600 1.0kb upstream 1.0kb upstream 1000 false Chr08: 5583819-5584818 Phaseolus vulgaris
Phvul.008G061600 1.0kb downstream 1.0kb downstream 4986 true Chr08: 5578833-5583818 Phaseolus vulgaris
Phvul.008G061600 1.0kb downstream 1.0kb downstream 1000 false Chr08: 5578833-5579832 Phaseolus vulgaris
Phvul.008G061600 2.0kb upstream 2.0kb upstream 5986 true Chr08: 5579833-5585818 Phaseolus vulgaris
Phvul.008G061600 2.0kb upstream 2.0kb upstream 2000 false Chr08: 5583819-5585818 Phaseolus vulgaris
Phvul.008G061600 2.0kb downstream 2.0kb downstream 5986 true Chr08: 5577833-5583818 Phaseolus vulgaris
Phvul.008G061600 2.0kb downstream 2.0kb downstream 2000 false Chr08: 5577833-5579832 Phaseolus vulgaris
Phvul.008G061600 5.0kb upstream 5.0kb upstream 8986 true Chr08: 5579833-5588818 Phaseolus vulgaris
Phvul.008G061600 5.0kb upstream 5.0kb upstream 5000 false Chr08: 5583819-5588818 Phaseolus vulgaris
Phvul.008G061600 5.0kb downstream 5.0kb downstream 8986 true Chr08: 5574833-5583818 Phaseolus vulgaris
Phvul.008G061600 5.0kb downstream 5.0kb downstream 5000 false Chr08: 5574833-5579832 Phaseolus vulgaris
Phvul.008G061600 10.0kb upstream 10.0kb upstream 13986 true Chr08: 5579833-5593818 Phaseolus vulgaris
Phvul.008G061600 10.0kb upstream 10.0kb upstream 10000 false Chr08: 5583819-5593818 Phaseolus vulgaris
Phvul.008G061600 10.0kb downstream 10.0kb downstream 13986 true Chr08: 5569833-5583818 Phaseolus vulgaris
Phvul.008G061600 10.0kb downstream 10.0kb downstream 10000 false Chr08: 5569833-5579832 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122303070 5265 Fabidae View MSA
124067075 5270 Rosid View MSA
123737373 5271 Pentapetalae View MSA
122786462 5272 Eudicot View MSA
122042611 5273 Angiosperm View MSA
123429170 5275 Viridiplantae View MSA
121346689 5274 Embryophyte View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 21.8587 0.0 57.3561    
cufflinks 13.2066 0.0 35.9037    
cufflinks 31.9882 0.0 82.7963   High
cufflinks 24.2939 0.0 63.6576   High
cufflinks 11.6955 0.0 32.2861    
cufflinks 21.3988 0.0 56.1905    
cufflinks 11.209 0.0 30.8937    
cufflinks 8.04493 0.0 22.8136   Low
cufflinks 7.00883 0.0 20.2079   Low
cufflinks 11.2623 0.0 31.0503    
cufflinks 14.8917 0.0 40.1605    

0 Strain