Gene : Phvul.008G061000 P. vulgaris v2.1
Defline:  (1 of 3) K11647 - SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 2/4 [EC:3.6.4.-] (SMARCA2_4) Genomic Order:  630
Name:  ? Phvul.008G061000 Secondary Identifier:  ? PAC:37159472
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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.008G061000 0.5kb upstream 0.5kb upstream 12870 true Chr08: 5525568-5538437 Phaseolus vulgaris
Phvul.008G061000 0.5kb upstream 0.5kb upstream 500 false Chr08: 5537938-5538437 Phaseolus vulgaris
Phvul.008G061000 0.5kb downstream 0.5kb downstream 12870 true Chr08: 5525068-5537937 Phaseolus vulgaris
Phvul.008G061000 0.5kb downstream 0.5kb downstream 500 false Chr08: 5525068-5525567 Phaseolus vulgaris
Phvul.008G061000 1.0kb upstream 1.0kb upstream 13370 true Chr08: 5525568-5538937 Phaseolus vulgaris
Phvul.008G061000 1.0kb upstream 1.0kb upstream 1000 false Chr08: 5537938-5538937 Phaseolus vulgaris
Phvul.008G061000 1.0kb downstream 1.0kb downstream 13370 true Chr08: 5524568-5537937 Phaseolus vulgaris
Phvul.008G061000 1.0kb downstream 1.0kb downstream 1000 false Chr08: 5524568-5525567 Phaseolus vulgaris
Phvul.008G061000 2.0kb upstream 2.0kb upstream 14370 true Chr08: 5525568-5539937 Phaseolus vulgaris
Phvul.008G061000 2.0kb upstream 2.0kb upstream 2000 false Chr08: 5537938-5539937 Phaseolus vulgaris
Phvul.008G061000 2.0kb downstream 2.0kb downstream 14370 true Chr08: 5523568-5537937 Phaseolus vulgaris
Phvul.008G061000 2.0kb downstream 2.0kb downstream 2000 false Chr08: 5523568-5525567 Phaseolus vulgaris
Phvul.008G061000 5.0kb upstream 5.0kb upstream 17370 true Chr08: 5525568-5542937 Phaseolus vulgaris
Phvul.008G061000 5.0kb upstream 5.0kb upstream 5000 false Chr08: 5537938-5542937 Phaseolus vulgaris
Phvul.008G061000 5.0kb downstream 5.0kb downstream 17370 true Chr08: 5520568-5537937 Phaseolus vulgaris
Phvul.008G061000 5.0kb downstream 5.0kb downstream 5000 false Chr08: 5520568-5525567 Phaseolus vulgaris
Phvul.008G061000 10.0kb upstream 10.0kb upstream 22370 true Chr08: 5525568-5547937 Phaseolus vulgaris
Phvul.008G061000 10.0kb upstream 10.0kb upstream 10000 false Chr08: 5537938-5547937 Phaseolus vulgaris
Phvul.008G061000 10.0kb downstream 10.0kb downstream 22370 true Chr08: 5515568-5537937 Phaseolus vulgaris
Phvul.008G061000 10.0kb downstream 10.0kb downstream 10000 false Chr08: 5515568-5525567 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121656128 5273 Angiosperm View MSA
122297518 5265 Fabidae View MSA
124036054 5270 Rosid View MSA
123609466 5271 Pentapetalae View MSA
122644114 5272 Eudicot View MSA
121349128 5274 Embryophyte View MSA
123428510 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.94278 0.0 5.23788   Low
cufflinks 7.31624 0.0 19.0274    
cufflinks 16.0858 0.0 44.2256    
cufflinks 2.13796 0.0 5.75685   Low
cufflinks 11.1457 0.0 29.5153    
cufflinks 16.9826 0.0 46.9299    
cufflinks 18.7223 0.0 52.4814    
cufflinks 14.05 0.0 38.3533    
cufflinks 16.3907 0.0 45.2437    
cufflinks 18.2462 0.0 50.7418    
cufflinks 7.50366 0.0 19.5092    

0 Strain