Gene : Phvul.008G061100 P. vulgaris v2.1
Defline:  (1 of 1) 4.4.1.9 - L-3-cyanoalanine synthase / Beta-cyanoalanine synthase Genomic Order:  631
Name:  ? Phvul.008G061100 Secondary Identifier:  ? PAC:37159207
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Sequence Feature Displayer

Ontology Annotation Displayer

4 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Pvulgaris ASPSYNII-PWY Phaseolus vulgaris pathologic  
Pvulgaris CYSTSYN-PWY Phaseolus vulgaris pathologic  
Pvulgaris P401-PWY Phaseolus vulgaris pathologic  
Pvulgaris PWY-6936 Phaseolus vulgaris pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.008G061100 0.5kb upstream 0.5kb upstream 4112 true Chr08: 5554616-5558727 Phaseolus vulgaris
Phvul.008G061100 0.5kb upstream 0.5kb upstream 500 false Chr08: 5558228-5558727 Phaseolus vulgaris
Phvul.008G061100 0.5kb downstream 0.5kb downstream 4112 true Chr08: 5554116-5558227 Phaseolus vulgaris
Phvul.008G061100 0.5kb downstream 0.5kb downstream 500 false Chr08: 5554116-5554615 Phaseolus vulgaris
Phvul.008G061100 1.0kb upstream 1.0kb upstream 4612 true Chr08: 5554616-5559227 Phaseolus vulgaris
Phvul.008G061100 1.0kb upstream 1.0kb upstream 1000 false Chr08: 5558228-5559227 Phaseolus vulgaris
Phvul.008G061100 1.0kb downstream 1.0kb downstream 4612 true Chr08: 5553616-5558227 Phaseolus vulgaris
Phvul.008G061100 1.0kb downstream 1.0kb downstream 1000 false Chr08: 5553616-5554615 Phaseolus vulgaris
Phvul.008G061100 2.0kb upstream 2.0kb upstream 5612 true Chr08: 5554616-5560227 Phaseolus vulgaris
Phvul.008G061100 2.0kb upstream 2.0kb upstream 2000 false Chr08: 5558228-5560227 Phaseolus vulgaris
Phvul.008G061100 2.0kb downstream 2.0kb downstream 5612 true Chr08: 5552616-5558227 Phaseolus vulgaris
Phvul.008G061100 2.0kb downstream 2.0kb downstream 2000 false Chr08: 5552616-5554615 Phaseolus vulgaris
Phvul.008G061100 5.0kb upstream 5.0kb upstream 8612 true Chr08: 5554616-5563227 Phaseolus vulgaris
Phvul.008G061100 5.0kb upstream 5.0kb upstream 5000 false Chr08: 5558228-5563227 Phaseolus vulgaris
Phvul.008G061100 5.0kb downstream 5.0kb downstream 8612 true Chr08: 5549616-5558227 Phaseolus vulgaris
Phvul.008G061100 5.0kb downstream 5.0kb downstream 5000 false Chr08: 5549616-5554615 Phaseolus vulgaris
Phvul.008G061100 10.0kb upstream 10.0kb upstream 13612 true Chr08: 5554616-5568227 Phaseolus vulgaris
Phvul.008G061100 10.0kb upstream 10.0kb upstream 10000 false Chr08: 5558228-5568227 Phaseolus vulgaris
Phvul.008G061100 10.0kb downstream 10.0kb downstream 13612 true Chr08: 5544616-5558227 Phaseolus vulgaris
Phvul.008G061100 10.0kb downstream 10.0kb downstream 10000 false Chr08: 5544616-5554615 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122040912 5273 Angiosperm View MSA
122299589 5265 Fabidae View MSA
124062527 5270 Rosid View MSA
123753614 5271 Pentapetalae View MSA
122790357 5272 Eudicot View MSA
121309765 5274 Embryophyte View MSA
123347430 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 54.0946 0.0 143.415 High High
cufflinks 29.2235 0.0 75.5958    
cufflinks 61.4748 0.0 165.126 High High
cufflinks 26.4615 0.0 68.4045    
cufflinks 9.70414 0.0 26.3624   Low
cufflinks 10.5802 0.0 28.3225   Low
cufflinks 31.3968 0.0 81.3339 High  
cufflinks 35.0386 0.0 91.1004 High  
cufflinks 39.0058 0.0 101.684 High  
cufflinks 38.2393 0.0 99.447 High  
cufflinks 11.9079 0.0 31.7688   Low

0 Strain