Gene : Phvul.008G062300 P. vulgaris v2.1
Defline:  (1 of 2) PTHR21726:SF30 - PHOSPHATIDYLINOSITOL N-ACETYGLUCOSAMINLYTRANSFERASE SUBUNIT P-LIKE PROTEIN Genomic Order:  643
Name:  ? Phvul.008G062300 Secondary Identifier:  ? PAC:37158606
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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.008G062300 0.5kb upstream 0.5kb upstream 7305 true Chr08: 5677479-5684783 Phaseolus vulgaris
Phvul.008G062300 0.5kb upstream 0.5kb upstream 500 false Chr08: 5677479-5677978 Phaseolus vulgaris
Phvul.008G062300 0.5kb downstream 0.5kb downstream 7305 true Chr08: 5677979-5685283 Phaseolus vulgaris
Phvul.008G062300 0.5kb downstream 0.5kb downstream 500 false Chr08: 5684784-5685283 Phaseolus vulgaris
Phvul.008G062300 1.0kb upstream 1.0kb upstream 7805 true Chr08: 5676979-5684783 Phaseolus vulgaris
Phvul.008G062300 1.0kb upstream 1.0kb upstream 1000 false Chr08: 5676979-5677978 Phaseolus vulgaris
Phvul.008G062300 1.0kb downstream 1.0kb downstream 7805 true Chr08: 5677979-5685783 Phaseolus vulgaris
Phvul.008G062300 1.0kb downstream 1.0kb downstream 1000 false Chr08: 5684784-5685783 Phaseolus vulgaris
Phvul.008G062300 2.0kb upstream 2.0kb upstream 8805 true Chr08: 5675979-5684783 Phaseolus vulgaris
Phvul.008G062300 2.0kb upstream 2.0kb upstream 2000 false Chr08: 5675979-5677978 Phaseolus vulgaris
Phvul.008G062300 2.0kb downstream 2.0kb downstream 8805 true Chr08: 5677979-5686783 Phaseolus vulgaris
Phvul.008G062300 2.0kb downstream 2.0kb downstream 2000 false Chr08: 5684784-5686783 Phaseolus vulgaris
Phvul.008G062300 5.0kb upstream 5.0kb upstream 11805 true Chr08: 5672979-5684783 Phaseolus vulgaris
Phvul.008G062300 5.0kb upstream 5.0kb upstream 5000 false Chr08: 5672979-5677978 Phaseolus vulgaris
Phvul.008G062300 5.0kb downstream 5.0kb downstream 11805 true Chr08: 5677979-5689783 Phaseolus vulgaris
Phvul.008G062300 5.0kb downstream 5.0kb downstream 5000 false Chr08: 5684784-5689783 Phaseolus vulgaris
Phvul.008G062300 10.0kb upstream 10.0kb upstream 16805 true Chr08: 5667979-5684783 Phaseolus vulgaris
Phvul.008G062300 10.0kb upstream 10.0kb upstream 10000 false Chr08: 5667979-5677978 Phaseolus vulgaris
Phvul.008G062300 10.0kb downstream 10.0kb downstream 16805 true Chr08: 5677979-5694783 Phaseolus vulgaris
Phvul.008G062300 10.0kb downstream 10.0kb downstream 10000 false Chr08: 5684784-5694783 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122301047 5265 Fabidae View MSA
124068071 5270 Rosid View MSA
123753280 5271 Pentapetalae View MSA
122795143 5272 Eudicot View MSA
122044494 5273 Angiosperm View MSA
121350314 5274 Embryophyte View MSA
123381675 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.94179 0.0 5.52862   Low
cufflinks 4.12341 0.0 11.025    
cufflinks 2.30289 0.0 6.44285   Low
cufflinks 1.29939 0.0 3.92592   Low
cufflinks 6.71209 0.0 17.5205    
cufflinks 7.7059 0.0 19.9611    
cufflinks 18.2862 0.0 48.1903   High
cufflinks 12.595 0.0 32.724    
cufflinks 18.8881 0.0 49.7755   High
cufflinks 7.10343 0.0 18.4491    
cufflinks 9.12694 0.0 23.6095    

0 Strain