Gene : Phvul.008G067600 P. vulgaris v2.1
Defline:  (1 of 1) K07178 - RIO kinase 1 (RIOK1) Genomic Order:  699
Name:  ? Phvul.008G067600 Secondary Identifier:  ? PAC:37160589
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0 Pathways

Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.008G067600 0.5kb upstream 0.5kb upstream 6290 true Chr08: 6169325-6175614 Phaseolus vulgaris
Phvul.008G067600 0.5kb upstream 0.5kb upstream 500 false Chr08: 6169325-6169824 Phaseolus vulgaris
Phvul.008G067600 0.5kb downstream 0.5kb downstream 6290 true Chr08: 6169825-6176114 Phaseolus vulgaris
Phvul.008G067600 0.5kb downstream 0.5kb downstream 500 false Chr08: 6175615-6176114 Phaseolus vulgaris
Phvul.008G067600 1.0kb upstream 1.0kb upstream 6790 true Chr08: 6168825-6175614 Phaseolus vulgaris
Phvul.008G067600 1.0kb upstream 1.0kb upstream 1000 false Chr08: 6168825-6169824 Phaseolus vulgaris
Phvul.008G067600 1.0kb downstream 1.0kb downstream 6790 true Chr08: 6169825-6176614 Phaseolus vulgaris
Phvul.008G067600 1.0kb downstream 1.0kb downstream 1000 false Chr08: 6175615-6176614 Phaseolus vulgaris
Phvul.008G067600 2.0kb upstream 2.0kb upstream 7790 true Chr08: 6167825-6175614 Phaseolus vulgaris
Phvul.008G067600 2.0kb upstream 2.0kb upstream 2000 false Chr08: 6167825-6169824 Phaseolus vulgaris
Phvul.008G067600 2.0kb downstream 2.0kb downstream 7790 true Chr08: 6169825-6177614 Phaseolus vulgaris
Phvul.008G067600 2.0kb downstream 2.0kb downstream 2000 false Chr08: 6175615-6177614 Phaseolus vulgaris
Phvul.008G067600 5.0kb upstream 5.0kb upstream 10790 true Chr08: 6164825-6175614 Phaseolus vulgaris
Phvul.008G067600 5.0kb upstream 5.0kb upstream 5000 false Chr08: 6164825-6169824 Phaseolus vulgaris
Phvul.008G067600 5.0kb downstream 5.0kb downstream 10790 true Chr08: 6169825-6180614 Phaseolus vulgaris
Phvul.008G067600 5.0kb downstream 5.0kb downstream 5000 false Chr08: 6175615-6180614 Phaseolus vulgaris
Phvul.008G067600 10.0kb upstream 10.0kb upstream 15790 true Chr08: 6159825-6175614 Phaseolus vulgaris
Phvul.008G067600 10.0kb upstream 10.0kb upstream 10000 false Chr08: 6159825-6169824 Phaseolus vulgaris
Phvul.008G067600 10.0kb downstream 10.0kb downstream 15790 true Chr08: 6169825-6185614 Phaseolus vulgaris
Phvul.008G067600 10.0kb downstream 10.0kb downstream 10000 false Chr08: 6175615-6185614 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122304723 5265 Fabidae View MSA
124062198 5270 Rosid View MSA
123740947 5271 Pentapetalae View MSA
122786592 5272 Eudicot View MSA
122044010 5273 Angiosperm View MSA
121344530 5274 Embryophyte View MSA
123428706 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 8.49828 0.0 22.7889    
cufflinks 9.5021 0.0 25.2802    
cufflinks 9.49817 0.0 25.2486    
cufflinks 4.8111 0.0 13.6702   Low
cufflinks 6.61256 0.0 18.2543   Low
cufflinks 7.56984 0.0 20.4679    
cufflinks 9.77504 0.0 25.9104    
cufflinks 11.9079 0.0 31.1587   High
cufflinks 9.29215 0.0 24.7293    
cufflinks 9.99109 0.0 26.5387    
cufflinks 8.35987 0.0 22.5486    

0 Strain