Gene : Phvul.008G070000 P. vulgaris v2.1
Defline:  (1 of 10) KOG4473 - Uncharacterized membrane protein Genomic Order:  724
Name:  ? Phvul.008G070000 Secondary Identifier:  ? PAC:37157783
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.008G070000 0.5kb upstream 0.5kb upstream 2992 true Chr08: 6339674-6342665 Phaseolus vulgaris
Phvul.008G070000 0.5kb upstream 0.5kb upstream 500 false Chr08: 6342166-6342665 Phaseolus vulgaris
Phvul.008G070000 0.5kb downstream 0.5kb downstream 2992 true Chr08: 6339174-6342165 Phaseolus vulgaris
Phvul.008G070000 0.5kb downstream 0.5kb downstream 500 false Chr08: 6339174-6339673 Phaseolus vulgaris
Phvul.008G070000 1.0kb upstream 1.0kb upstream 3492 true Chr08: 6339674-6343165 Phaseolus vulgaris
Phvul.008G070000 1.0kb upstream 1.0kb upstream 1000 false Chr08: 6342166-6343165 Phaseolus vulgaris
Phvul.008G070000 1.0kb downstream 1.0kb downstream 3492 true Chr08: 6338674-6342165 Phaseolus vulgaris
Phvul.008G070000 1.0kb downstream 1.0kb downstream 1000 false Chr08: 6338674-6339673 Phaseolus vulgaris
Phvul.008G070000 2.0kb upstream 2.0kb upstream 4492 true Chr08: 6339674-6344165 Phaseolus vulgaris
Phvul.008G070000 2.0kb upstream 2.0kb upstream 2000 false Chr08: 6342166-6344165 Phaseolus vulgaris
Phvul.008G070000 2.0kb downstream 2.0kb downstream 4492 true Chr08: 6337674-6342165 Phaseolus vulgaris
Phvul.008G070000 2.0kb downstream 2.0kb downstream 2000 false Chr08: 6337674-6339673 Phaseolus vulgaris
Phvul.008G070000 5.0kb upstream 5.0kb upstream 7492 true Chr08: 6339674-6347165 Phaseolus vulgaris
Phvul.008G070000 5.0kb upstream 5.0kb upstream 5000 false Chr08: 6342166-6347165 Phaseolus vulgaris
Phvul.008G070000 5.0kb downstream 5.0kb downstream 7492 true Chr08: 6334674-6342165 Phaseolus vulgaris
Phvul.008G070000 5.0kb downstream 5.0kb downstream 5000 false Chr08: 6334674-6339673 Phaseolus vulgaris
Phvul.008G070000 10.0kb upstream 10.0kb upstream 12492 true Chr08: 6339674-6352165 Phaseolus vulgaris
Phvul.008G070000 10.0kb upstream 10.0kb upstream 10000 false Chr08: 6342166-6352165 Phaseolus vulgaris
Phvul.008G070000 10.0kb downstream 10.0kb downstream 12492 true Chr08: 6329674-6342165 Phaseolus vulgaris
Phvul.008G070000 10.0kb downstream 10.0kb downstream 10000 false Chr08: 6329674-6339673 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121791847 5273 Angiosperm View MSA
122302729 5265 Fabidae View MSA
124070582 5270 Rosid View MSA
123742461 5271 Pentapetalae View MSA
122794648 5272 Eudicot View MSA
121348483 5274 Embryophyte View MSA
123428360 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.44721 0.0 8.1503    
cufflinks 3.51955 0.0 14.5307   High
cufflinks 0.237996 0.0 2.86086 Low Low
cufflinks 2.20171 0.0 10.4679    
cufflinks 1.5559 0.0 8.20112    
cufflinks 0.968658 0.0 6.39598    
cufflinks 0.299094 0.0 3.16944 Low  
cufflinks 0.478678 0.0 4.52498    
cufflinks 0.0802921 0.0 1.50622 Low Low
cufflinks 0.594039 0.0 4.7377    
cufflinks 2.94275 0.0 12.41   High

0 Strain