Gene : Phvul.008G070200 P. vulgaris v2.1
Defline:  (1 of 1) PTHR11081:SF23 - FLAP ENDONUCLEASE GEN HOMOLOG 1 Genomic Order:  726
Name:  ? Phvul.008G070200 Secondary Identifier:  ? PAC:37161273
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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Cufflinks Score Displayer

 

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.008G070200 0.5kb upstream 0.5kb upstream 5737 true Chr08: 6359870-6365606 Phaseolus vulgaris
Phvul.008G070200 0.5kb upstream 0.5kb upstream 500 false Chr08: 6359870-6360369 Phaseolus vulgaris
Phvul.008G070200 0.5kb downstream 0.5kb downstream 5737 true Chr08: 6360370-6366106 Phaseolus vulgaris
Phvul.008G070200 0.5kb downstream 0.5kb downstream 500 false Chr08: 6365607-6366106 Phaseolus vulgaris
Phvul.008G070200 1.0kb upstream 1.0kb upstream 6237 true Chr08: 6359370-6365606 Phaseolus vulgaris
Phvul.008G070200 1.0kb upstream 1.0kb upstream 1000 false Chr08: 6359370-6360369 Phaseolus vulgaris
Phvul.008G070200 1.0kb downstream 1.0kb downstream 6237 true Chr08: 6360370-6366606 Phaseolus vulgaris
Phvul.008G070200 1.0kb downstream 1.0kb downstream 1000 false Chr08: 6365607-6366606 Phaseolus vulgaris
Phvul.008G070200 2.0kb upstream 2.0kb upstream 7237 true Chr08: 6358370-6365606 Phaseolus vulgaris
Phvul.008G070200 2.0kb upstream 2.0kb upstream 2000 false Chr08: 6358370-6360369 Phaseolus vulgaris
Phvul.008G070200 2.0kb downstream 2.0kb downstream 7237 true Chr08: 6360370-6367606 Phaseolus vulgaris
Phvul.008G070200 2.0kb downstream 2.0kb downstream 2000 false Chr08: 6365607-6367606 Phaseolus vulgaris
Phvul.008G070200 5.0kb upstream 5.0kb upstream 10237 true Chr08: 6355370-6365606 Phaseolus vulgaris
Phvul.008G070200 5.0kb upstream 5.0kb upstream 5000 false Chr08: 6355370-6360369 Phaseolus vulgaris
Phvul.008G070200 5.0kb downstream 5.0kb downstream 10237 true Chr08: 6360370-6370606 Phaseolus vulgaris
Phvul.008G070200 5.0kb downstream 5.0kb downstream 5000 false Chr08: 6365607-6370606 Phaseolus vulgaris
Phvul.008G070200 10.0kb upstream 10.0kb upstream 15237 true Chr08: 6350370-6365606 Phaseolus vulgaris
Phvul.008G070200 10.0kb upstream 10.0kb upstream 10000 false Chr08: 6350370-6360369 Phaseolus vulgaris
Phvul.008G070200 10.0kb downstream 10.0kb downstream 15237 true Chr08: 6360370-6375606 Phaseolus vulgaris
Phvul.008G070200 10.0kb downstream 10.0kb downstream 10000 false Chr08: 6365607-6375606 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122306463 5265 Fabidae View MSA
124071440 5270 Rosid View MSA
123738836 5271 Pentapetalae View MSA
122786263 5272 Eudicot View MSA
122047356 5273 Angiosperm View MSA
121351404 5274 Embryophyte View MSA
123425829 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.626159 0.0 2.73569    
cufflinks 1.95391 0.0 10.9063    
cufflinks 0.27343 0.0 1.29117 Low Low
cufflinks 0.647717 0.0 2.8973    
cufflinks 0.821118 0.0 5.00107    
cufflinks 2.85915 0.0 14.9259    
cufflinks 2.98394 0.0 12.1205    
cufflinks 19.0997 0.0 60.6473   High
cufflinks 0.57456 0.0 2.56844    
cufflinks 0.206886 0.0 0.8112 Low Low
cufflinks 1.01718 0.0 6.16444    

0 Strain