Gene : Phvul.008G219400 P. vulgaris v2.1
Defline:  (1 of 2) PTHR31045:SF4 - (Z)-GAMMA-BISABOLENE SYNTHASE 1-RELATED Genomic Order:  2233
Name:  ? Phvul.008G219400 Secondary Identifier:  ? PAC:37160205
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Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.008G219400 0.5kb upstream 0.5kb upstream 2559 true Chr08: 56877794-56880352 Phaseolus vulgaris
Phvul.008G219400 0.5kb upstream 0.5kb upstream 500 false Chr08: 56877794-56878293 Phaseolus vulgaris
Phvul.008G219400 0.5kb downstream 0.5kb downstream 2559 true Chr08: 56878294-56880852 Phaseolus vulgaris
Phvul.008G219400 0.5kb downstream 0.5kb downstream 500 false Chr08: 56880353-56880852 Phaseolus vulgaris
Phvul.008G219400 1.0kb upstream 1.0kb upstream 3059 true Chr08: 56877294-56880352 Phaseolus vulgaris
Phvul.008G219400 1.0kb upstream 1.0kb upstream 1000 false Chr08: 56877294-56878293 Phaseolus vulgaris
Phvul.008G219400 1.0kb downstream 1.0kb downstream 3059 true Chr08: 56878294-56881352 Phaseolus vulgaris
Phvul.008G219400 1.0kb downstream 1.0kb downstream 1000 false Chr08: 56880353-56881352 Phaseolus vulgaris
Phvul.008G219400 2.0kb upstream 2.0kb upstream 4059 true Chr08: 56876294-56880352 Phaseolus vulgaris
Phvul.008G219400 2.0kb upstream 2.0kb upstream 2000 false Chr08: 56876294-56878293 Phaseolus vulgaris
Phvul.008G219400 2.0kb downstream 2.0kb downstream 4059 true Chr08: 56878294-56882352 Phaseolus vulgaris
Phvul.008G219400 2.0kb downstream 2.0kb downstream 2000 false Chr08: 56880353-56882352 Phaseolus vulgaris
Phvul.008G219400 5.0kb upstream 5.0kb upstream 7059 true Chr08: 56873294-56880352 Phaseolus vulgaris
Phvul.008G219400 5.0kb upstream 5.0kb upstream 5000 false Chr08: 56873294-56878293 Phaseolus vulgaris
Phvul.008G219400 5.0kb downstream 5.0kb downstream 7059 true Chr08: 56878294-56885352 Phaseolus vulgaris
Phvul.008G219400 5.0kb downstream 5.0kb downstream 5000 false Chr08: 56880353-56885352 Phaseolus vulgaris
Phvul.008G219400 10.0kb upstream 10.0kb upstream 12059 true Chr08: 56868294-56880352 Phaseolus vulgaris
Phvul.008G219400 10.0kb upstream 10.0kb upstream 10000 false Chr08: 56868294-56878293 Phaseolus vulgaris
Phvul.008G219400 10.0kb downstream 10.0kb downstream 12059 true Chr08: 56878294-56890352 Phaseolus vulgaris
Phvul.008G219400 10.0kb downstream 10.0kb downstream 10000 false Chr08: 56880353-56890352 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122300025 5265 Fabidae View MSA
124061942 5270 Rosid View MSA
123744852 5271 Pentapetalae View MSA
122790012 5272 Eudicot View MSA
122046321 5273 Angiosperm View MSA
121349634 5274 Embryophyte View MSA
123381382 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 6.88031 0.0 19.0068    
cufflinks 4.6478 0.0 13.3076    
cufflinks 6.2602 0.0 17.3643    
cufflinks 4.32102 0.0 12.5795   Low
cufflinks 5.77811 0.0 16.2775    
cufflinks 5.25658 0.0 14.8576    
cufflinks 7.98804 0.0 21.7843   High
cufflinks 4.65214 0.0 13.2479    
cufflinks 10.5023 0.0 28.0809   High
cufflinks 7.6018 0.0 20.8286    
cufflinks 5.06809 0.0 14.4686    

0 Strain