Gene : Phvul.008G219600 P. vulgaris v2.1
Defline:  (1 of 2) PTHR22814:SF60 - HEAVY METAL TRANSPORT/DETOXIFICATION SUPERFAMILY PROTEIN Genomic Order:  2235
Name:  ? Phvul.008G219600 Secondary Identifier:  ? PAC:37158966
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Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.008G219600 0.5kb upstream 0.5kb upstream 1753 true Chr08: 56885820-56887572 Phaseolus vulgaris
Phvul.008G219600 0.5kb upstream 0.5kb upstream 500 false Chr08: 56885820-56886319 Phaseolus vulgaris
Phvul.008G219600 0.5kb downstream 0.5kb downstream 1753 true Chr08: 56886320-56888072 Phaseolus vulgaris
Phvul.008G219600 0.5kb downstream 0.5kb downstream 500 false Chr08: 56887573-56888072 Phaseolus vulgaris
Phvul.008G219600 1.0kb upstream 1.0kb upstream 2253 true Chr08: 56885320-56887572 Phaseolus vulgaris
Phvul.008G219600 1.0kb upstream 1.0kb upstream 1000 false Chr08: 56885320-56886319 Phaseolus vulgaris
Phvul.008G219600 1.0kb downstream 1.0kb downstream 2253 true Chr08: 56886320-56888572 Phaseolus vulgaris
Phvul.008G219600 1.0kb downstream 1.0kb downstream 1000 false Chr08: 56887573-56888572 Phaseolus vulgaris
Phvul.008G219600 2.0kb upstream 2.0kb upstream 3253 true Chr08: 56884320-56887572 Phaseolus vulgaris
Phvul.008G219600 2.0kb upstream 2.0kb upstream 2000 false Chr08: 56884320-56886319 Phaseolus vulgaris
Phvul.008G219600 2.0kb downstream 2.0kb downstream 3253 true Chr08: 56886320-56889572 Phaseolus vulgaris
Phvul.008G219600 2.0kb downstream 2.0kb downstream 2000 false Chr08: 56887573-56889572 Phaseolus vulgaris
Phvul.008G219600 5.0kb upstream 5.0kb upstream 6253 true Chr08: 56881320-56887572 Phaseolus vulgaris
Phvul.008G219600 5.0kb upstream 5.0kb upstream 5000 false Chr08: 56881320-56886319 Phaseolus vulgaris
Phvul.008G219600 5.0kb downstream 5.0kb downstream 6253 true Chr08: 56886320-56892572 Phaseolus vulgaris
Phvul.008G219600 5.0kb downstream 5.0kb downstream 5000 false Chr08: 56887573-56892572 Phaseolus vulgaris
Phvul.008G219600 10.0kb upstream 10.0kb upstream 11253 true Chr08: 56876320-56887572 Phaseolus vulgaris
Phvul.008G219600 10.0kb upstream 10.0kb upstream 10000 false Chr08: 56876320-56886319 Phaseolus vulgaris
Phvul.008G219600 10.0kb downstream 10.0kb downstream 11253 true Chr08: 56886320-56897572 Phaseolus vulgaris
Phvul.008G219600 10.0kb downstream 10.0kb downstream 10000 false Chr08: 56887573-56897572 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122040990 5273 Angiosperm View MSA
122314139 5265 Fabidae View MSA
124065552 5270 Rosid View MSA
123743211 5271 Pentapetalae View MSA
122791151 5272 Eudicot View MSA
121351529 5274 Embryophyte View MSA
123424750 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 36.111 0.0 96.4898 High High
cufflinks 1.19629 0.0 4.53582    
cufflinks 1.66805 0.0 6.11737    
cufflinks 10.4788 0.0 31.9133   High
cufflinks 1.09961 0.0 4.24557    
cufflinks 0.323555 0.0 1.35998 Low Low
cufflinks 1.52055 0.0 5.65932    
cufflinks 0.581002 0.0 2.3146    
cufflinks 0.399365 0.0 1.6565 Low  
cufflinks 0.855566 0.0 3.33842    
cufflinks 1.89125 0.0 6.95844    

0 Strain