Gene : Phvul.008G057900 P. vulgaris v2.1
Defline:  (1 of 1) PTHR31459:SF3 - DESICCATION-RELATED PROTEIN LEA14-RELATED Genomic Order:  599
Name:  ? Phvul.008G057900 Secondary Identifier:  ? PAC:37160501
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0 Pathways

Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.008G057900 0.5kb upstream 0.5kb upstream 1737 true Chr08: 5149862-5151598 Phaseolus vulgaris
Phvul.008G057900 0.5kb upstream 0.5kb upstream 500 false Chr08: 5151099-5151598 Phaseolus vulgaris
Phvul.008G057900 0.5kb downstream 0.5kb downstream 1737 true Chr08: 5149362-5151098 Phaseolus vulgaris
Phvul.008G057900 0.5kb downstream 0.5kb downstream 500 false Chr08: 5149362-5149861 Phaseolus vulgaris
Phvul.008G057900 1.0kb upstream 1.0kb upstream 2237 true Chr08: 5149862-5152098 Phaseolus vulgaris
Phvul.008G057900 1.0kb upstream 1.0kb upstream 1000 false Chr08: 5151099-5152098 Phaseolus vulgaris
Phvul.008G057900 1.0kb downstream 1.0kb downstream 2237 true Chr08: 5148862-5151098 Phaseolus vulgaris
Phvul.008G057900 1.0kb downstream 1.0kb downstream 1000 false Chr08: 5148862-5149861 Phaseolus vulgaris
Phvul.008G057900 2.0kb upstream 2.0kb upstream 3237 true Chr08: 5149862-5153098 Phaseolus vulgaris
Phvul.008G057900 2.0kb upstream 2.0kb upstream 2000 false Chr08: 5151099-5153098 Phaseolus vulgaris
Phvul.008G057900 2.0kb downstream 2.0kb downstream 3237 true Chr08: 5147862-5151098 Phaseolus vulgaris
Phvul.008G057900 2.0kb downstream 2.0kb downstream 2000 false Chr08: 5147862-5149861 Phaseolus vulgaris
Phvul.008G057900 5.0kb upstream 5.0kb upstream 6237 true Chr08: 5149862-5156098 Phaseolus vulgaris
Phvul.008G057900 5.0kb upstream 5.0kb upstream 5000 false Chr08: 5151099-5156098 Phaseolus vulgaris
Phvul.008G057900 5.0kb downstream 5.0kb downstream 6237 true Chr08: 5144862-5151098 Phaseolus vulgaris
Phvul.008G057900 5.0kb downstream 5.0kb downstream 5000 false Chr08: 5144862-5149861 Phaseolus vulgaris
Phvul.008G057900 10.0kb upstream 10.0kb upstream 11237 true Chr08: 5149862-5161098 Phaseolus vulgaris
Phvul.008G057900 10.0kb upstream 10.0kb upstream 10000 false Chr08: 5151099-5161098 Phaseolus vulgaris
Phvul.008G057900 10.0kb downstream 10.0kb downstream 11237 true Chr08: 5139862-5151098 Phaseolus vulgaris
Phvul.008G057900 10.0kb downstream 10.0kb downstream 10000 false Chr08: 5139862-5149861 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122311929 5265 Fabidae View MSA
124063327 5270 Rosid View MSA
123749565 5271 Pentapetalae View MSA
122795600 5272 Eudicot View MSA
122043658 5273 Angiosperm View MSA
121348077 5274 Embryophyte View MSA
123380721 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 23.3963 0.0 62.4145    
cufflinks 6.32114 0.0 19.1424   Low
cufflinks 13.7669 0.0 38.516    
cufflinks 28.8318 0.0 75.8344    
cufflinks 11.4553 0.0 32.45    
cufflinks 13.1557 0.0 36.9228    
cufflinks 36.8116 0.0 95.6232 High High
cufflinks 50.8526 0.0 131.468 High High
cufflinks 21.0853 0.0 56.494    
cufflinks 17.8798 0.0 48.7445    
cufflinks 28.0522 0.0 73.7917    

0 Strain