Gene : Phvul.008G219500 P. vulgaris v2.1
Defline:  (1 of 3) 3.1.31.1 - Micrococcal nuclease / Micrococcal endonuclease Genomic Order:  2234
Name:  ? Phvul.008G219500 Secondary Identifier:  ? PAC:37157676
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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.008G219500 0.5kb upstream 0.5kb upstream 2873 true Chr08: 56882025-56884897 Phaseolus vulgaris
Phvul.008G219500 0.5kb upstream 0.5kb upstream 500 false Chr08: 56884398-56884897 Phaseolus vulgaris
Phvul.008G219500 0.5kb downstream 0.5kb downstream 2873 true Chr08: 56881525-56884397 Phaseolus vulgaris
Phvul.008G219500 0.5kb downstream 0.5kb downstream 500 false Chr08: 56881525-56882024 Phaseolus vulgaris
Phvul.008G219500 1.0kb upstream 1.0kb upstream 3373 true Chr08: 56882025-56885397 Phaseolus vulgaris
Phvul.008G219500 1.0kb upstream 1.0kb upstream 1000 false Chr08: 56884398-56885397 Phaseolus vulgaris
Phvul.008G219500 1.0kb downstream 1.0kb downstream 3373 true Chr08: 56881025-56884397 Phaseolus vulgaris
Phvul.008G219500 1.0kb downstream 1.0kb downstream 1000 false Chr08: 56881025-56882024 Phaseolus vulgaris
Phvul.008G219500 2.0kb upstream 2.0kb upstream 4373 true Chr08: 56882025-56886397 Phaseolus vulgaris
Phvul.008G219500 2.0kb upstream 2.0kb upstream 2000 false Chr08: 56884398-56886397 Phaseolus vulgaris
Phvul.008G219500 2.0kb downstream 2.0kb downstream 4373 true Chr08: 56880025-56884397 Phaseolus vulgaris
Phvul.008G219500 2.0kb downstream 2.0kb downstream 2000 false Chr08: 56880025-56882024 Phaseolus vulgaris
Phvul.008G219500 5.0kb upstream 5.0kb upstream 7373 true Chr08: 56882025-56889397 Phaseolus vulgaris
Phvul.008G219500 5.0kb upstream 5.0kb upstream 5000 false Chr08: 56884398-56889397 Phaseolus vulgaris
Phvul.008G219500 5.0kb downstream 5.0kb downstream 7373 true Chr08: 56877025-56884397 Phaseolus vulgaris
Phvul.008G219500 5.0kb downstream 5.0kb downstream 5000 false Chr08: 56877025-56882024 Phaseolus vulgaris
Phvul.008G219500 10.0kb upstream 10.0kb upstream 12373 true Chr08: 56882025-56894397 Phaseolus vulgaris
Phvul.008G219500 10.0kb upstream 10.0kb upstream 10000 false Chr08: 56884398-56894397 Phaseolus vulgaris
Phvul.008G219500 10.0kb downstream 10.0kb downstream 12373 true Chr08: 56872025-56884397 Phaseolus vulgaris
Phvul.008G219500 10.0kb downstream 10.0kb downstream 10000 false Chr08: 56872025-56882024 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122310857 5265 Fabidae View MSA
124062964 5270 Rosid View MSA
123736698 5271 Pentapetalae View MSA
122792401 5272 Eudicot View MSA
122046760 5273 Angiosperm View MSA
121347603 5274 Embryophyte View MSA
123428455 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 26.3209 0.0 68.0481   High
cufflinks 16.3172 0.0 42.7385    
cufflinks 13.9416 0.0 36.7924    
cufflinks 8.71874 0.0 23.9652   Low
cufflinks 12.2512 0.0 32.8257    
cufflinks 10.3477 0.0 27.933   Low
cufflinks 24.8451 0.0 64.2407   High
cufflinks 23.5367 0.0 60.8791    
cufflinks 15.5594 0.0 40.7605    
cufflinks 23.195 0.0 60.0725    
cufflinks 19.7235 0.0 51.3188    

0 Strain