Gene : Phvul.008G045900 P. vulgaris v2.1
Genomic Order:  474 Name:  ? Phvul.008G045900
Secondary Identifier:  ? PAC:37159507
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0 Pathways

Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.008G045900 0.5kb upstream 0.5kb upstream 3928 true Chr08: 3928873-3932800 Phaseolus vulgaris
Phvul.008G045900 0.5kb upstream 0.5kb upstream 500 false Chr08: 3928873-3929372 Phaseolus vulgaris
Phvul.008G045900 0.5kb downstream 0.5kb downstream 3928 true Chr08: 3929373-3933300 Phaseolus vulgaris
Phvul.008G045900 0.5kb downstream 0.5kb downstream 500 false Chr08: 3932801-3933300 Phaseolus vulgaris
Phvul.008G045900 1.0kb upstream 1.0kb upstream 4428 true Chr08: 3928373-3932800 Phaseolus vulgaris
Phvul.008G045900 1.0kb upstream 1.0kb upstream 1000 false Chr08: 3928373-3929372 Phaseolus vulgaris
Phvul.008G045900 1.0kb downstream 1.0kb downstream 4428 true Chr08: 3929373-3933800 Phaseolus vulgaris
Phvul.008G045900 1.0kb downstream 1.0kb downstream 1000 false Chr08: 3932801-3933800 Phaseolus vulgaris
Phvul.008G045900 2.0kb upstream 2.0kb upstream 5428 true Chr08: 3927373-3932800 Phaseolus vulgaris
Phvul.008G045900 2.0kb upstream 2.0kb upstream 2000 false Chr08: 3927373-3929372 Phaseolus vulgaris
Phvul.008G045900 2.0kb downstream 2.0kb downstream 5428 true Chr08: 3929373-3934800 Phaseolus vulgaris
Phvul.008G045900 2.0kb downstream 2.0kb downstream 2000 false Chr08: 3932801-3934800 Phaseolus vulgaris
Phvul.008G045900 5.0kb upstream 5.0kb upstream 8428 true Chr08: 3924373-3932800 Phaseolus vulgaris
Phvul.008G045900 5.0kb upstream 5.0kb upstream 5000 false Chr08: 3924373-3929372 Phaseolus vulgaris
Phvul.008G045900 5.0kb downstream 5.0kb downstream 8428 true Chr08: 3929373-3937800 Phaseolus vulgaris
Phvul.008G045900 5.0kb downstream 5.0kb downstream 5000 false Chr08: 3932801-3937800 Phaseolus vulgaris
Phvul.008G045900 10.0kb upstream 10.0kb upstream 13428 true Chr08: 3919373-3932800 Phaseolus vulgaris
Phvul.008G045900 10.0kb upstream 10.0kb upstream 10000 false Chr08: 3919373-3929372 Phaseolus vulgaris
Phvul.008G045900 10.0kb downstream 10.0kb downstream 13428 true Chr08: 3929373-3942800 Phaseolus vulgaris
Phvul.008G045900 10.0kb downstream 10.0kb downstream 10000 false Chr08: 3932801-3942800 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122296201 5265 Fabidae View MSA
124050535 5270 Rosid View MSA
123740345 5271 Pentapetalae View MSA
122790196 5272 Eudicot View MSA
122045175 5273 Angiosperm View MSA
121351591 5274 Embryophyte View MSA
123427027 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 9.69587 0.0 33.7773   High
cufflinks 5.12902 0.0 17.6813   Low
cufflinks 9.97206 0.0 31.4377   High
cufflinks 5.49375 0.0 18.8181   Low
cufflinks 7.15762 0.0 23.4174    
cufflinks 5.86623 0.0 19.5322    
cufflinks 7.14141 0.0 22.9044    
cufflinks 6.01508 0.0 22.8456    
cufflinks 8.14461 0.0 29.5372    
cufflinks 7.07509 0.0 26.4703    
cufflinks 7.26456 0.0 27.2609    

0 Strain