Gene : Phvul.008G046400 P. vulgaris v2.1
Defline:  (1 of 7) PTHR31190:SF21 - ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR 13 Genomic Order:  479
Name:  ? Phvul.008G046400 Secondary Identifier:  ? PAC:37158788
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.008G046400 0.5kb upstream 0.5kb upstream 1124 true Chr08: 3961558-3962681 Phaseolus vulgaris
Phvul.008G046400 0.5kb upstream 0.5kb upstream 500 false Chr08: 3962182-3962681 Phaseolus vulgaris
Phvul.008G046400 0.5kb downstream 0.5kb downstream 1124 true Chr08: 3961058-3962181 Phaseolus vulgaris
Phvul.008G046400 0.5kb downstream 0.5kb downstream 500 false Chr08: 3961058-3961557 Phaseolus vulgaris
Phvul.008G046400 1.0kb upstream 1.0kb upstream 1624 true Chr08: 3961558-3963181 Phaseolus vulgaris
Phvul.008G046400 1.0kb upstream 1.0kb upstream 1000 false Chr08: 3962182-3963181 Phaseolus vulgaris
Phvul.008G046400 1.0kb downstream 1.0kb downstream 1624 true Chr08: 3960558-3962181 Phaseolus vulgaris
Phvul.008G046400 1.0kb downstream 1.0kb downstream 1000 false Chr08: 3960558-3961557 Phaseolus vulgaris
Phvul.008G046400 2.0kb upstream 2.0kb upstream 2624 true Chr08: 3961558-3964181 Phaseolus vulgaris
Phvul.008G046400 2.0kb upstream 2.0kb upstream 2000 false Chr08: 3962182-3964181 Phaseolus vulgaris
Phvul.008G046400 2.0kb downstream 2.0kb downstream 2624 true Chr08: 3959558-3962181 Phaseolus vulgaris
Phvul.008G046400 2.0kb downstream 2.0kb downstream 2000 false Chr08: 3959558-3961557 Phaseolus vulgaris
Phvul.008G046400 5.0kb upstream 5.0kb upstream 5624 true Chr08: 3961558-3967181 Phaseolus vulgaris
Phvul.008G046400 5.0kb upstream 5.0kb upstream 5000 false Chr08: 3962182-3967181 Phaseolus vulgaris
Phvul.008G046400 5.0kb downstream 5.0kb downstream 5624 true Chr08: 3956558-3962181 Phaseolus vulgaris
Phvul.008G046400 5.0kb downstream 5.0kb downstream 5000 false Chr08: 3956558-3961557 Phaseolus vulgaris
Phvul.008G046400 10.0kb upstream 10.0kb upstream 10624 true Chr08: 3961558-3972181 Phaseolus vulgaris
Phvul.008G046400 10.0kb upstream 10.0kb upstream 10000 false Chr08: 3962182-3972181 Phaseolus vulgaris
Phvul.008G046400 10.0kb downstream 10.0kb downstream 10624 true Chr08: 3951558-3962181 Phaseolus vulgaris
Phvul.008G046400 10.0kb downstream 10.0kb downstream 10000 false Chr08: 3951558-3961557 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122315208 5265 Fabidae View MSA
124072415 5270 Rosid View MSA
123749179 5271 Pentapetalae View MSA
122791440 5272 Eudicot View MSA
122050930 5273 Angiosperm View MSA
123428898 5275 Viridiplantae View MSA
121351000 5274 Embryophyte View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.232081 0.0 0.997949 Low  
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 1.0287 0.0 3.93901    
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 36.7342 0.0 97.4488 High  
cufflinks 33.5244 0.0 89.8359 High  
cufflinks 73.4375 0.0 189.841 High High
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.116061 0.0 0.534713 Low Low

0 Strain