Gene : Phvul.008G049200 P. vulgaris v2.1
Defline:  (1 of 4) KOG0884 - Similar to cyclophilin-type peptidyl-prolyl cis-trans isomerase Genomic Order:  508
Name:  ? Phvul.008G049200 Secondary Identifier:  ? PAC:37157692
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.008G049200 0.5kb upstream 0.5kb upstream 5075 true Chr08: 4294944-4300018 Phaseolus vulgaris
Phvul.008G049200 0.5kb upstream 0.5kb upstream 500 false Chr08: 4294944-4295443 Phaseolus vulgaris
Phvul.008G049200 0.5kb downstream 0.5kb downstream 5075 true Chr08: 4295444-4300518 Phaseolus vulgaris
Phvul.008G049200 0.5kb downstream 0.5kb downstream 500 false Chr08: 4300019-4300518 Phaseolus vulgaris
Phvul.008G049200 1.0kb upstream 1.0kb upstream 5575 true Chr08: 4294444-4300018 Phaseolus vulgaris
Phvul.008G049200 1.0kb upstream 1.0kb upstream 1000 false Chr08: 4294444-4295443 Phaseolus vulgaris
Phvul.008G049200 1.0kb downstream 1.0kb downstream 5575 true Chr08: 4295444-4301018 Phaseolus vulgaris
Phvul.008G049200 1.0kb downstream 1.0kb downstream 1000 false Chr08: 4300019-4301018 Phaseolus vulgaris
Phvul.008G049200 2.0kb upstream 2.0kb upstream 6575 true Chr08: 4293444-4300018 Phaseolus vulgaris
Phvul.008G049200 2.0kb upstream 2.0kb upstream 2000 false Chr08: 4293444-4295443 Phaseolus vulgaris
Phvul.008G049200 2.0kb downstream 2.0kb downstream 6575 true Chr08: 4295444-4302018 Phaseolus vulgaris
Phvul.008G049200 2.0kb downstream 2.0kb downstream 2000 false Chr08: 4300019-4302018 Phaseolus vulgaris
Phvul.008G049200 5.0kb upstream 5.0kb upstream 9575 true Chr08: 4290444-4300018 Phaseolus vulgaris
Phvul.008G049200 5.0kb upstream 5.0kb upstream 5000 false Chr08: 4290444-4295443 Phaseolus vulgaris
Phvul.008G049200 5.0kb downstream 5.0kb downstream 9575 true Chr08: 4295444-4305018 Phaseolus vulgaris
Phvul.008G049200 5.0kb downstream 5.0kb downstream 5000 false Chr08: 4300019-4305018 Phaseolus vulgaris
Phvul.008G049200 10.0kb upstream 10.0kb upstream 14575 true Chr08: 4285444-4300018 Phaseolus vulgaris
Phvul.008G049200 10.0kb upstream 10.0kb upstream 10000 false Chr08: 4285444-4295443 Phaseolus vulgaris
Phvul.008G049200 10.0kb downstream 10.0kb downstream 14575 true Chr08: 4295444-4310018 Phaseolus vulgaris
Phvul.008G049200 10.0kb downstream 10.0kb downstream 10000 false Chr08: 4300019-4310018 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122308221 5265 Fabidae View MSA
124071456 5270 Rosid View MSA
123751062 5271 Pentapetalae View MSA
122773901 5272 Eudicot View MSA
122043023 5273 Angiosperm View MSA
121350933 5274 Embryophyte View MSA
123428077 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.4555 0.0 7.7571    
cufflinks 2.85791 0.0 8.91156    
cufflinks 2.97893 0.0 9.22016    
cufflinks 5.06084 0.0 14.8985   High
cufflinks 2.08757 0.0 6.77265    
cufflinks 3.26774 0.0 10.0317    
cufflinks 1.0088 0.0 3.52838   Low
cufflinks 1.24451 0.0 4.23446   Low
cufflinks 1.54285 0.0 5.17984    
cufflinks 1.63465 0.0 5.42455    
cufflinks 2.61749 0.0 8.26914    

0 Strain